PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3641
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Subtree rooted at node 99: /----- Carubv10017859m [Capsella rubella] (2) /---100---+ | \----- Cagra.0925s0055.1.p [Capsella grandiflora] (27) | /-100-+ /----- Csa06g031120.1 [Camelina sativa] (39) | | /-97-+ | | | \----- Csa04g042820.1 [Camelina sativa] (45) /-76-+ \-100+ | | \---------- Csa09g068690.1 [Camelina sativa] (43) | | /-100+ \--------------------- Bostr.20505s0113.1.p [Boechera stricta] (16) | | | \-------------------------- 867069 [Arabidopsis lyrata] (40) | | /----- GSBRNA2T00027496001 [Brassica napus] (7) | /-100+ | | \----- XP_013635595.1 [Brassica oleracea] (29) /-100+ /-100+ | | | | /----- XP_009139103.1 [Brassica rapa] (20) | | | \-100+ | | /-100-+ \----- GSBRNA2T00126204001 [Brassica napus] (42) | | | | | | | | /----- RrC14207_p1 [Raphanus raphanistrum] (13) | | | \---100---+ | \---100---+ \----- Rsa1.0_00313.1_g00007.1 [Raphanus sativus] (31) /---------82---------+ | | | | /---------- GSBRNA2T00071376001 [Brassica napus] (21) | | | | | | \----100---+ /----- XP_013591265.1 [Brassica oleracea] (32) | | \-50-+ | | \----- XP_013590681.1 [Brassica oleracea] (38) | | | | /----- XP_010540363.1 [Tarenaya hassleriana] (48) | \--------------100-------------+ | \----- XP_010554995.1 [Tarenaya hassleriana] (51) | | /------------------------------------ Tp4g23050 [Thellungiella parvula] (3) | | | | /----- RrC4903_p2 [Raphanus raphanistrum] (4) | | /------100------+ | | | \----- Rsa1.0_03420.1_g00003.1 [Raphanus sativus] (46) | | | | | | /----- XP_013635488.1 [Brassica oleracea] (8) | | /-100+ /-99-+ | | | | | \----- GSBRNA2T00020650001 [Brassica napus] (15) | | | | /-71-+ | /-100+ | | | \---------- GSBRNA2T00123274001 [Brassica napus] (25) | | | | \-100-+ | | | | \--------------- XP_009141930.1 [Brassica rapa] (14) | | | | /-100+ | | /-84-+ /----- GSBRNA2T00019024001 [Brassica napus] (9) | | | | | | /-100+ | | | | | | | \----- XP_013627772.1 [Brassica oleracea] (53) | | | | | | /-100+ | | | | | | | | /----- GSBRNA2T00058443001 [Brassica napus] (34) | | /-100+ | | | | \-100+ | | | | \-51-+ \----100---+ \----- XP_009133452.1 [Brassica rapa] (55) | | | | | | | | | | | | /----- Rsa1.0_02438.1_g00008.1 [Raphanus sativus] (30) | | | | | \---100---+ | | | | | \----- RrC1546_p2 [Raphanus raphanistrum] (37) | | | | | | | | | \------------------------------- 676735696 [Sisymbrium irio] (26) | | | | | | | \----------------------------------------- Thhalv10017926m [Eutrema salsugineum] (10) | | | | | /--92-+ /--------------------- Bostr.9345s0061.1.p [Boechera stricta] (5) | | | | | --100+ | | | | /---------- Csa04g055090.1 [Camelina sativa] (17) | | | | | | | | | | /-100+ /-100+ /----- Csa06g045170.1 [Camelina sativa] (47) | | | | | | | \-99-+ | | | | | | | \----- Csa05g011970.1 [Camelina sativa] (52) | | | | | \--86-+ | | | | | | /----- Carubv10023773m [Capsella rubella] (36) | \-100+ | | \---100---+ | | \--------100--------+ \----- Cagra.1642s0038.1.p [Capsella grandiflora] (44) | | | | | | /----- Araha.8490s0017.1.p [Arabidopsis halleri] (28) | | | /-100+ | | | | \----- 321760 [Arabidopsis lyrata] (33) | | \------100------+ | | \---------- AT2G40740.1 [Arabidopsis thaliana] (54) | | | \---------------------------------------------------- KFK36945.1 [Arabis alpina] (57) | \-------------------------------------------------------------- evm.model.supercontig_19.45 [Carica papaya] (50) Root part of tree: /------------------------------------------------------------------- Gorai.012G014000.1 [Gossypium raimondii] (1) | |------------------------------------------------------------------- Gh_D04G0113 [Gossypium hirsutum] (41) | | /------------------- (99) | | | /----89---+ /---------- Eucgr.J02653.1.p [Eucalyptus grandis] (18) | | \---99---+ | | \---------- orange1.1g041468m [Citrus sinensis] (49) | | | /---70---+ /---------- Ciclev10033384m [Citrus clementina] (11) + | | /---100--+ | | | | \---------- orange1.1g018407m [Citrus sinensis] (35) | | \---100---+ | | \------------------- Neem_4449_f_1 [Azadirachta indica] (12) | /---100---+ | | | /---------- Eucgr.G03144.1.p [Eucalyptus grandis] (19) | | | /---99---+ | | | | \---------- EcS781533.10 [Eucalyptus camaldulensis] (24) | /---100--+ \--------95--------+ | | | \------------------- Eucgr.J00107.1.p [Eucalyptus grandis] (56) | | | \----98---+ \------------------------------------------------ Thecc1EG045555t1 [Theobroma cacao] (22) | | /---------- Gh_A05G3498 [Gossypium hirsutum] (6) \----------------------100---------------------+ \---------- Cotton_A_06024_BGI-A2_v1.0 [Gossypium arboreum] (23) |