PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.J02653.1.p | ||||||||
Common Name | EUGRSUZ_J02653 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 121aa MW: 13735.3 Da PI: 6.9285 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98 | 6.2e-31 | 14 | 71 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 dDg++WrKYGqKe+ gs++pr YYrCt+ gC++kk+v+rs++dp+v+ei+Y+g+H++ Eucgr.J02653.1.p 14 DDGFSWRKYGQKEILGSKYPRDYYRCTHVqGCWAKKQVQRSDDDPTVFEIMYHGRHTC 71 8***************************99**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.6E-29 | 6 | 71 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.15E-27 | 8 | 71 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.2E-37 | 13 | 73 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 21.964 | 14 | 69 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.3E-27 | 14 | 71 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence Send to blast |
MQKWTERVRA PTPDDGFSWR KYGQKEILGS KYPRDYYRCT HVQGCWAKKQ VQRSDDDPTV 60 FEIMYHGRHT CIDHPATVVP PSPLPENQTD SNASIDDAPL QIRELPVFVS AATSGNNSQA 120 T |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 2e-19 | 8 | 71 | 3 | 68 | OsWRKY45 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:20409006). May regulate the early events of leaf senescence (PubMed:17369373, PubMed:20409006). Negatively regulates the expression of ESR/ESP (PubMed:20409006). Together with WRKY46 and WRKY70, promotes resistance to P.syringae, probably by enhancing salicylic acid (SA)- dependent genes. Contributes to the suppression of jasmonic acid (MeJA)-induced expression of PDF1.2 (PubMed:22325892). {ECO:0000269|PubMed:17369373, ECO:0000269|PubMed:20409006, ECO:0000269|PubMed:22325892}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.J02653.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid (SA) (PubMed:22268143, PubMed:22325892). Strong accumulation during leaf senescence (PubMed:22268143). Down-regulated by jasmonate. Triggered by P.syringae (PubMed:22325892). {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11506370, ECO:0000269|PubMed:17369373, ECO:0000269|PubMed:22268143, ECO:0000269|PubMed:22325892}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010034734.1 | 5e-84 | PREDICTED: probable disease resistance protein At5g47260 isoform X1 | ||||
Swissprot | Q9SUP6 | 6e-29 | WRK53_ARATH; Probable WRKY transcription factor 53 | ||||
TrEMBL | A0A059AHV2 | 8e-87 | A0A059AHV2_EUCGR; Uncharacterized protein (Fragment) | ||||
STRING | XP_010034734.1 | 2e-83 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3641 | 27 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 2e-31 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.J02653.1.p |