PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A05G3498
Common NameWRKY101
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family WRKY
Protein Properties Length: 366aa    MW: 40151.7 Da    PI: 6.7229
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A05G3498genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.89.1e-28175235259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  dD y+WrKYGqKe+ gs++pr+YYrCt++   +Cp+kk+v+r ++d  ++e+tY g+H+++
  Gh_A05G3498 175 DDNYTWRKYGQKEILGSKYPRAYYRCTHQkmyNCPAKKQVQRLDNDFYTFEVTYIGQHTCT 235
                  8***************************9999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-26169235IPR003657WRKY domain
SuperFamilySSF1182901.96E-25172236IPR003657WRKY domain
SMARTSM007749.4E-36174236IPR003657WRKY domain
PfamPF031061.5E-24175234IPR003657WRKY domain
PROSITE profilePS5081121.012175237IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MDQQQQQHTT LSLILDGCKL AKELEECIGN LGNQLQPEIL SKSCDDIINI FVTAKQRLNN  60
NAHHHHHHHH QDPSLFTHHL LHPPQDSSAH HMQTDPSLQE WLKYGVITQA VDMIQSCRPS  120
ISMGGEIQAM DVSDSGKAAS SSSSQRSHRS RKDDEEKCKT RVAAPQMGNT DLPPDDNYTW  180
RKYGQKEILG SKYPRAYYRC THQKMYNCPA KKQVQRLDND FYTFEVTYIG QHTCTMSSTA  240
PSIPQPPPLL HDQMVMTQAM VSQPALPPIS SSTTSSSIAP FGSWLSMEFS LGSGSGGRGS  300
GGAGSSSGGG SATGSRYGRD VEYPAVADMA DVMFNSGSSS SNSMDFIFPC AEDKWEAPGS  360
GDKKHC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-18175234968OsWRKY45
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6697770.0KF669777.1 Gossypium hirsutum WRKY transcription factor 101 (WRKY101) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016755469.10.0PREDICTED: WRKY transcription factor 55-like
TrEMBLA0A1U8PYX10.0A0A1U8PYX1_GOSHI; WRKY transcription factor 55-like
STRINGGorai.012G014000.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM36412757
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.17e-49WRKY DNA-binding protein 55
Publications ? help Back to Top
  1. Dou L, et al.
    Genome-wide analysis of the WRKY gene family in cotton.
    Mol. Genet. Genomics, 2014. 289(6): p. 1103-21
    [PMID:24942461]