PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEF2778
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Subtree rooted at node 127: /----- FANhyb_icon00000180_a.1.g00001.1 [Fragaria x ananassa] (2) /-100+ | \----- mrna03650.1-v1.0-hybrid [Fragaria vesca] (20) /----100---+ | \---------- FANhyb_rscf00000068.1.g00015.1 [Fragaria x ananassa] (45) | | /----- Pbr013366.1 [Pyrus bretschneideri] (10) | /-100+ /------89------+ | \----- MDP0000251967 [Malus domestica] (25) | | /-100+ | | | | /----- MDP0000313949 [Malus domestica] (14) | | | \-100+ | \-100-+ \----- Pbr028771.1 [Pyrus bretschneideri] (33) | | | | /----- Prupe.1G318500.1.p [Prunus persica] (22) | \---100---+ | \----- XP_008243302.1 [Prunus mume] (58) | | /----- KHN06707.1 [Glycine soja] (3) | /-100+ | | \----- Glyma.10G269300.1.p [Glycine max] (66) | /-100+ | | | /----- Glyma.20G121800.1.p [Glycine max] (15) | | \-98-+ /-57-+ | \----- KHN42418.1 [Glycine soja] (49) | | /--82-+ | | | | /----- Vradi08g20910.1 [Vigna radiata] (26) | | | | /-63-+ | | | | | \----- Vang06g01270.1 [Vigna angularis] (35) | | /-100+ \-74-+ | | | | \---------- Phvul.007G033200.1 [Phaseolus vulgaris] (44) | | | | | | | \--------------------- C.cajan_07605 [Cajanus cajan] (38) | | | | | |-------------------------- Medtr5g090040.1 [Medicago truncatula] (17) | | /-67-+ | | | | /----- Medtr1g109320.1 [Medicago truncatula] (18) | | | | /-63-+ | | | | | \----- Tp57577_TGAC_v2_mRNA5022 [Trifolium pratense] (29) | | | | /-59-+ /-61-+ \-100+ | | \---------- XP_004497020.1 [Cicer arietinum] (40) | | | \----53----+ | | | \--------------- Lj5g3v2179600.1 [Lotus japonicus] (31) | | | | | | /----- Araip.WZG9Z [Arachis ipaensis] (9) | | \-----------100-----------+ | | \----- Aradu.N5GDJ [Arachis duranensis] (28) | | | | /----- HL.SW.v1.0.G036444.1 [Humulus lupulus] (32) | | /-100+ | | | \----- HL.SW.v1.0.G005111.1 [Humulus lupulus] (46) /----83----+ | /-100+ | | | | \---------- PK08294.1 [Cannabis sativa] (53) | | | /-100-+ | | | | \--------------- XP_010101712.1 [Morus notabilis] (62) | | \---------95--------+ | | \--------------------- XP_015876715.1 [Ziziphus jujuba] (57) | | | | /----- MELO3C005335P1 [Cucumis melo] (6) | | /-100+ | | | \----- Cucsa.280660.1 [Cucumis sativus] (11) | \----------------100----------------+ | \---------- Cla003898 [Citrullus lanatus] (43) | | /----- Potri.004G095100.1 [Populus trichocarpa] (4) | /-100+ | | \----- CCG034226.1 [Populus euphratica] (51) | /-100+ | | \---------- SapurV1A.0575s0100.1.p [Salix purpurea] (27) | | | /-100-+ /----- Potri.017G119900.1 [Populus trichocarpa] (16) | | | /-100+ | | | | \----- CCG001199.1 [Populus euphratica] (68) | | \-100+ /-99-+ | | /----- SapurV1A.1197s0170.1.p [Salix purpurea] (30) | | | \-100+ | | | \----- SapurV1A.1854s0030.1.p [Salix purpurea] (41) | | /--------------100-------------+ | | | | /----- Manes.01G113200.1.p [Manihot esculenta] (19) | | | | /-100+ | | | | | \----- Manes.02G072100.1.p [Manihot esculenta] (63) | | | | /-99-+ | | | | | \---------- Jcr4S02139.50 [Jatropha curcas] (34) | | | \-100-+ | | | \--------------- 29586.m000617 [Ricinus communis] (24) | | | | | | /----- MDP0000311868 [Malus domestica] (21) | | | /-100+ | | | | \----- MDP0000217945 [Malus domestica] (39) | | | /-100+ | | | | | /----- Pbr032194.1 [Pyrus bretschneideri] (54) | | | | \-100+ | | | /--83-+ \----- Pbr037100.1 [Pyrus bretschneideri] (55) | | | | | | | | | | /----- Pbr032568.1 [Pyrus bretschneideri] (56) | | | | \---100---+ | \-100+ /-100+ \----- MDP0000941410 [Malus domestica] (61) --100+ | | | | | | | /----- Prupe.3G149200.1.p [Prunus persica] (42) | | /-100+ \------100------+ | | | | \----- XP_008229277.1 [Prunus mume] (69) | | | | | | | \-------------------------- mrna22412.1-v1.0-hybrid [Fragaria vesca] (60) | | /-98-+ | | | | /----- HL.SW.v1.0.G043472.1 [Humulus lupulus] (23) | | | | /-100+ | | | | | \----- PK28804.1 [Cannabis sativa] (67) | | /-100+ \---------100--------+ | | | | \---------- XP_010108899.1 [Morus notabilis] (37) | | | | | | /-96-+ \------------------------------------ XP_015880036.1 [Ziziphus jujuba] (52) | | | | | | | \----------------------------------------- augustus_masked-scaffold01775-abinit-gene-0.7-mRNA-1 [Castanea mollissima] (65) | | | | \--85-+ /----- Cucsa.087930.1 [Cucumis sativus] (36) | | /-100+ | | | \----- MELO3C008166P1 [Cucumis melo] (59) | \----------------100----------------+ | \---------- Cla011852 [Citrullus lanatus] (48) | \-------------------------------------------------------------- maker-scaffold04505-augustus-gene-0.13-mRNA-1 [Castanea mollissima] (8) Root part of tree: /------------------------------------------------------------------- Lus10035256 [Linum usitatissimum] (1) | |------------------------------------------------------------------- Lus10034624 [Linum usitatissimum] (7) | + /------------------------------------------------------ (127) | | | | /------------- CCG003843.1 [Populus euphratica] (5) | | /------85-----+ \-----100----+ | \------------- Potri.010G118700.1 [Populus trichocarpa] (13) | /-----100----+ | | \--------------------------- SapurV1A.0120s0410.1.p [Salix purpurea] (64) | | \------78-----+ /------------- 29660.m000770 [Ricinus communis] (12) | /------87-----+ | | \------------- Jcr4S01684.40 [Jatropha curcas] (50) \-----100----+ \--------------------------- Manes.14G108300.1.p [Manihot esculenta] (47) |