PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP5113
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Subtree rooted at node 94: /----- Pavir.6KG323300.1.p [Panicum virgatum] (3) /-100+ | \----- Pahal.C02324.1 [Panicum hallii] (47) /-100+ | | /----- Seita.3G179300.1.p [Setaria italica] (23) | \-100+ /-100-+ \----- Sevir.3G183400.1.p [Setaria viridis] (39) | | | | /----- GRMZM2G441325_P01 [Zea mays] (30) /--------------100-------------+ \---100---+ | | \----- Sobic.009G196900.1.p [Sorghum bicolor] (45) | | | \--------------------- 462888637 [Eragrostis tef] (56) | | /--------------- OBART05G22670.1 [Oryza barthii] (4) | | | | /---------- ONIVA05G23630.1 [Oryza nivara] (10) | | | | /-100-+-100+ /----- ORUFI05G24090.1 [Oryza rufipogon] (15) | | | \-100+ | | | \----- LOC_Os05g43920.1 [Oryza sativa japonica] (38) | /-100+ | | | | \--------------- ORGLA05G0198900.1 [Oryza glaberrima] (52) /-100+ | | | | /-100+ \--------------------- OGLUM05G23980.1 [Oryza glumaepatula] (40) | | | | | | /-100+ \-------------------------- OMERI05G20390.2 [Oryza meridionalis] (41) | | | | | | /-100+ \------------------------------- OPUNC05G20300.1 [Oryza punctata] (8) | | | | | | /-100+ \------------------------------------ OB05G30280.1 [Oryza brachyantha] (6) | | | | | | | \----------------------------------------- LPERR05G18660.1 [Leersia perrieri] (37) | | | | | | /----- Bradi2g19867.1.p [Brachypodium distachyon] (14) | | | /------100------+ | | | | \----- Brast08G060900.1.p [Brachypodium stacei] (26) /-100+ \-100-+ | | | | /-100+ /--------------- MLOC_38232.1 [Hordeum vulgare] (16) | | | | | | | | | | | | /----- TRIUR3_14814-P1 [Triticum urartu] (20) | | | | \-100-+ /-99-+ | | | | | | \----- Traes_1AL_B14FE48AF.1 [Triticum aestivum] (44) | | \--------100--------+ \-100+ | | | | /----- Traes_1DL_92BCA55C0.2 [Triticum aestivum] (43) | | | \-100+ | | | \----- EMT08561 [Aegilops tauschii] (51) | | | | | \-------------------------- PH01000237G0420 [Phyllostachys heterocycla] (24) | | --100+ | /----- PH01000018G0940 [Phyllostachys heterocycla] (21) | \------------------------100------------------------+ | \----- PH01000277G0820 [Phyllostachys heterocycla] (22) | | /----- TRIUR3_35254-P1 [Triticum urartu] (17) | /-100+ | | \----- Traes_3AL_A30A3C355.1 [Triticum aestivum] (53) | /-100+ | | | /----- EMT18418 [Aegilops tauschii] (19) | | \-100+ | /-100-+ \----- Traes_3DL_734F1498E.1 [Triticum aestivum] (42) | | | | | \--------------- MLOC_66439.1 [Hordeum vulgare] (29) \-------------------100------------------+ | /----- Bradi2g50120.2.p [Brachypodium distachyon] (36) \------100------+ \----- Brast01G143400.1.p [Brachypodium stacei] (55) Root part of tree: /------------------------------------------------------------------- 462863710 [Eragrostis tef] (1) | |------------------------------------------------------------------- 462880794 [Eragrostis tef] (49) | | /------------------ OGLUM01G35360.1 [Oryza glumaepatula] (2) | | | |------------------ BGIOSGA000812-PA [Oryza sativa indica] (7) | | | | /------ ONIVA01G35630.1 [Oryza nivara] (27) | /-100-+ /-100-+ | | | | \------ ORUFI01G34340.1 [Oryza rufipogon] (50) | | |-100-+ | | | \------------ OBART01G31160.1 [Oryza barthii] (32) | /--85-+ | | | | \------------------ LOC_Os01g54990.1 [Oryza sativa japonica] (54) | | | | /--100-+ \------------------------ KN538824.1_FGP009 [Oryza longistaminata] (31) | | | | /-100-+ \------------------------------ OMERI01G28330.1 [Oryza meridionalis] (11) + | | | | \------------------------------------- OPUNC01G30260.2 [Oryza punctata] (13) | /-100-+ | | |------------------------------------------- OB01G40150.1 [Oryza brachyantha] (5) | | | | /-100-+ \------------------------------------------- LPERR01G26810.1 [Leersia perrieri] (34) | | | | | \------------------------------------------------- (94) | | | | /------ Sevir.5G324700.1.p [Setaria viridis] (9) | | /----100----+ | | | \------ Seita.5G321300.1.p [Setaria italica] (48) | /-100-+ | | | | /-100-+ /------ Pavir.5NG501200.1.p [Panicum virgatum] (18) | | | | | /--91-+ | | | | | | \------ Pavir.5KG543000.1.p [Panicum virgatum] (28) | | | | \-100-+ | | | | \------------ Pahal.E01610.1 [Panicum hallii] (46) | | \--------------100-------------+ \-100-+ | /------ GRMZM5G874163_P03 [Zea mays] (12) | | /--61-+ | | | \------ GRMZM2G056120_P01 [Zea mays] (35) | \----100----+ | \------------ Sobic.003G298600.1.p [Sorghum bicolor] (33) | \------------------------------------------------------------- Oropetium_20150105_12537A [Oropetium thomaeum] (25) |