PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP3809
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Subtree rooted at node 111: /---------- GSMUA_Achr11P14570_001 [Musa acuminata] (2) | /-100+ /----- GSMUA_Achr5P26200_001 [Musa acuminata] (49) | \-68-+ /-------------------100-------------------+ \----- GSMUA_Achr3P22700_001 [Musa acuminata] (52) | | | \--------------- XP_010907586.1 [Elaeis guineensis] (16) | | /----- Zmw_sc04328.1.g00040.1 [Zoysia matrella] (4) | /-100+ | | \----- Zjn_sc00012.1.g05560.1.sm.mkhc [Zoysia japonica] (54) | /-100+ | | | /----- Zpz_sc00158.1.g00560.1.sm.mkhc [Zoysia pacifica] (34) | | \-100+ | | \----- Zmw_sc01866.1.g00120.1 [Zoysia matrella] (59) | | | /------100------+ /----- 462894297 [Eragrostis tef] (6) | | |---100---+ | | | \----- 462870894 [Eragrostis tef] (32) | | | | | \--------------- Oropetium_20150105_04954A [Oropetium thomaeum] (43) | | | | /----- Pahal.C02813.1 [Panicum hallii] (8) /-100+ | /-70-+ | | | | \----- Pavir.5NG114300.1.p [Panicum virgatum] (21) | | /---------100--------+ /-100+ | | | | | \---------- Pavir.1KG240700.1.p [Panicum virgatum] (37) | | | | /--88-+ | | | | | | /----- Seita.3G224800.1.p [Setaria italica] (14) | | | | | \---100---+ | | | | /-100+ \----- Sevir.3G229900.1.p [Setaria viridis] (64) | | | | | | | | | | | \--------------------- Do023573.1 [Dichanthelium oligosanthes] (35) | | | \-100+ | | | | /----- GRMZM2G000842_P03 [Zea mays] (10) | | | \---------100--------+ | | | \----- Sobic.009G155050.1.p [Sorghum bicolor] (55) | | | | | | /----- Traes_1AL_3B659AABA.1 [Triticum aestivum] (5) | | | /-100+ | | | | \----- Traes_1BL_B03720C3B.2 [Triticum aestivum] (39) | \-100+ /-100+ | | | \---------- Traes_1DL_AFDF3B024.1 [Triticum aestivum] (20) | | /-100-+ | | | \--------------- MLOC_79223.3 [Hordeum vulgare] (51) | | /-----------100----------+ | | | | /----- Bradi2g23890.4.p [Brachypodium distachyon] (29) | | | \------100------+ | | | \----- Brast08G104100.1.p [Brachypodium stacei] (44) | | | | | | /----- ONIVA05G19180.5 [Oryza nivara] (9) | | | /------------88-----------+ | | | | \----- BGIOSGA019942-PA [Oryza sativa indica] (38) | | | | | | | | /-------------------------- KN538883.1_FGP024 [Oryza longistaminata] (15) --100+ | | | | | | | | | /---------- OGLUM05G19350.3 [Oryza glumaepatula] (46) | \--76-+ | | | | | |-59-+ /-95-+ /----- OPUNC05G16070.1 [Oryza punctata] (57) | | | | | \-53-+ | | /-63-+ | /--75-+ \----- ORUFI05G19430.2 [Oryza rufipogon] (58) | | | | | | | | | | | \-75-+ \--------------- OMERI05G15750.1 [Oryza meridionalis] (56) | | | | | | | | | \--------------------- OBART05G18270.2 [Oryza barthii] (50) | | /-87-+ | | | | | |------------------------------- LOC_Os05g37170.1 [Oryza sativa japonica] (23) | | | | | | | | | \------------------------------- ORGLA05G0158500.1 [Oryza glaberrima] (45) | \-100+ | | | \------------------------------------ LPERR05G14450.1 [Leersia perrieri] (62) | | | \----------------------------------------- OB05G26080.1 [Oryza brachyantha] (22) | | /----- OB01G46780.1 [Oryza brachyantha] (3) | /---------99---------+ | | \----- LPERR01G32640.1 [Leersia perrieri] (18) | | | /-100+ /--------------------- OPUNC01G36830.1 [Oryza punctata] (19) | | | | | | | | /--------------- ORGLA01G0318100.1 [Oryza glaberrima] (30) | | \-100+ | | | | | /----- OBART01G38000.2 [Oryza barthii] (42) | | \--99-+ /-100+ | | | | \----- OGLUM01G42170.3 [Oryza glumaepatula] (47) | | \-84-+ \--------------71--------------+ | /----- LOC_Os01g64020.1 [Oryza sativa japonica] (65) | \-51-+ | \----- BGIOSGA000451-PA [Oryza sativa indica] (66) | | /----- Bradi2g55567.2.p [Brachypodium distachyon] (17) | /---100---+ | | \----- Brast01G082400.1.p [Brachypodium stacei] (61) | | \------100------+ /---------- MLOC_65998.3 [Hordeum vulgare] (25) | | \-100+ /----- TRAES3BF099600030CFD_t1 [Triticum aestivum] (31) \-100+ \----- TRIUR3_12645-P1 [Triticum urartu] (36) Root part of tree: /------------------------------------------------------------------- Sevir.5G394700.1.p [Setaria viridis] (1) | |------------------------------------------------------------------- Seita.5G389500.1.p [Setaria italica] (12) | | /------------------------------------------ (111) | | | | /-------- Zjn_sc00009.1.g05760.1.sm.mkhc [Zoysia japonica] (7) | | /-----------100----------+ | /--100--+ | \-------- Zpz_sc02319.1.g00060.1.sm.mkhc [Zoysia pacifica] (26) | | | | | | | | /-------- Zjn_sc00034.1.g06210.1.sm.mkhc [Zoysia japonica] (13) | | | | /---100--+ + | \---100--+ | \-------- Zmw_sc02565.1.g00020.1 [Zoysia matrella] (41) | | | /--100--+ | | | | | /-------- Zmw_sc02884.1.g00120.1 [Zoysia matrella] (60) | | | | \---96---+ | /---100--+ \---75--+ \-------- Zpz_sc01335.1.g00120.1.sm.mkhc [Zoysia pacifica] (63) | | | | | | | \------------------------- Oropetium_20150105_12866A [Oropetium thomaeum] (48) | | | | | | /-------- AC232238.2_FGP004 [Zea mays] (27) | | | /---60---+ | | | | \-------- Sobic.003G363600.1.p [Sorghum bicolor] (28) | | \---------------100--------------+ \--100--+ \----------------- GRMZM2G060216_P01 [Zea mays] (40) | | /-------- Pavir.9NG563900.1.p [Panicum virgatum] (11) | /---100--+ | | \-------- Pahal.E00863.1 [Panicum hallii] (24) | /--100--+ | | \----------------- Pavir.5KG654700.1.p [Panicum virgatum] (33) \----------------97---------------+ \------------------------- Do009343.1 [Dichanthelium oligosanthes] (53) |