PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00009.1.g05760.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 363aa MW: 40737.2 Da PI: 7.6609 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.9 | 1.6e-11 | 82 | 112 | 4 | 34 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 +k err+++NReAAr+sR+RKka++++Le+ Zjn_sc00009.1.g05760.1.sm.mkhc 82 SKTERRLAQNREAARKSRLRKKAYVQQLETS 112 799*************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-7 | 79 | 145 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.266 | 81 | 125 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.2E-8 | 81 | 125 | No hit | No description |
Pfam | PF00170 | 3.3E-8 | 83 | 116 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.13E-7 | 83 | 126 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 86 | 101 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.7E-29 | 164 | 238 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence Send to blast |
MSQMSQMELV SPASSAQRQE VMMVTTDDYS YYKPGLAAAA PPPPAPAAAP SFQQQPMQQL 60 HGGDHDKRKH GSTRKDGKLV DSKTERRLAQ NREAARKSRL RKKAYVQQLE TSRVRLQQVE 120 HELQRARSQG LFVGGCSAAG DMSSGAVMFD MEYARWLEDD SKRLAELHGG LQAQLLDSNL 180 GLIVEECMQH YDELFQLKAE LARSDVFHLL TGTWATPAER CFFWMGGFRP SELLKILIPQ 240 LDPLTEQQML GIRNLQQSSE QAEEALAQGL HQLHQSLADT VAAGTLNDGA AVPNYTSLMA 300 VALEKLASLE SFYQQADSLR QQTLHQMRRI LTTRQTARCF LSIGEYYRRL RALSGLWNSS 360 PRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF036949 | 0.0 | AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025818708.1 | 0.0 | transcription factor LG2 isoform X1 | ||||
Swissprot | O49067 | 0.0 | LG2_MAIZE; Transcription factor LG2 | ||||
TrEMBL | A0A2T8IJA5 | 0.0 | A0A2T8IJA5_9POAL; Uncharacterized protein | ||||
STRING | GRMZM2G060216_P01 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3809 | 31 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 1e-137 | bZIP family protein |
Publications ? help Back to Top | |||
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