PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00034.1.g06210.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 374aa    MW: 42178.8 Da    PI: 5.8905
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00034.1.g06210.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.88.4e-126293233
                                    XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLee 33
                                    + +k err+ +NReAAr+sR+RKka++++Le+
  Zjn_sc00034.1.g06210.1.sm.mkhc 62 EHDKTERRLVQNREAARKSRLRKKAYVQQLET 93
                                    578***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-857107No hitNo description
SMARTSM003383.2E-661137IPR004827Basic-leucine zipper domain
PfamPF001707.1E-96395IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.9963107IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.04E-765108No hitNo description
PROSITE patternPS0003606883IPR004827Basic-leucine zipper domain
PfamPF141445.1E-29145220IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MSQMELVSPA SSALRQEVMM VTTDDYSYSY RPGLAAAAPP PPAPAAAPSF QQQPMQQLHG  60
GEHDKTERRL VQNREAARKS RLRKKAYVQQ LETSRIRLQQ VEHELQRARS QGLFVGGCSA  120
AGDMSSGAAM FELEYARWLD DDSKQLEELR GGLQAQLLDG NLGLIVEECM QHYDELFQLK  180
AELARSDVFH LLTGIWATPA ERCFFWMGGF RPSELLKILM QQLDPMTEQQ MMGICNLQQS  240
SEQAEEALAQ GLHQLHQSLA DTVAAGTLND GVVTPNYMNL MALALEKLAS LESFYQQADN  300
LRQQTLHQMR RILTTRQAAR CFLSIGEYYR RLRALSNLWA SRPRENFNGT ESISPTATEL  360
QAMLQQQQNQ FSGF
Functional Description ? help Back to Top
Source Description
UniProtRequired for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0369490.0AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025818709.10.0transcription factor LG2 isoform X2
SwissprotO490670.0LG2_MAIZE; Transcription factor LG2
TrEMBLA0A2T8IJA60.0A0A2T8IJA6_9POAL; Uncharacterized protein
STRINGGRMZM2G060216_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-120bZIP family protein
Publications ? help Back to Top
  1. Walsh J,Freeling M
    The liguleless2 gene of maize functions during the transition from the vegetative to the reproductive shoot apex.
    Plant J., 1999. 19(4): p. 489-95
    [PMID:10504571]
  2. Schnable PS, et al.
    The B73 maize genome: complexity, diversity, and dynamics.
    Science, 2009. 326(5956): p. 1112-5
    [PMID:19965430]