PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR05G14450.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 590aa    MW: 65237 Da    PI: 7.4302
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR05G14450.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.78e-11280309433
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                       k e+r+++NReAAr+sR+RKka++++Le+
  LPERR05G14450.1 280 AKTEKRLAQNREAARKSRLRKKAYVQQLET 309
                      699*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-6277353IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243279323IPR004827Basic-leucine zipper domain
PfamPF001701.0E-7280310IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-6281324No hitNo description
Gene3DG3DSA:1.20.5.1706.6E-7281310No hitNo description
PROSITE patternPS000360284299IPR004827Basic-leucine zipper domain
PfamPF141446.7E-28362436IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 590 aa     Download sequence    Send to blast
MYGPVAFQLR LGPCQKIAEV TACIFSGRSD HLAAAPPAVL AWPRPRPRPW PPPANPKKIH  60
SPLPPLAASE SMSPSRFYCQ SRSSRLDRSP GKVREVLGGW QVIMTEQYHS AKQLHMESKA  120
MLGLQPATAA YFGELEKALI HGTSAGAGVD PGMIQSDAYT ESAGYIAARP PTLEIFPSWP  180
MSHLQDPYSQ NSQSVGSTTD SSSAQNTMSQ AELVSPVSVR SDSGHEQQQQ EVLMVTIDDY  240
NYKQGLGAAI ATAPSFQQHA GGLDMRKHGS TRKDGKLLDA KTEKRLAQNR EAARKSRLRK  300
KAYVQQLETS RIRLQQIEQE LQRARSQGLF PGGCSAPGDM SSGAVMFDME YTRWLDDDSK  360
CMAELQGALQ AQLPDGNLGA IVEECMLHYD ELFHLRAVLA NSDVFHLLTG MWAAPAERCF  420
LWMAGFRPSK ILKMLIPQLD PLTEQQLMGM CGLQQSSEQT EEALAQGLHQ LHQSLADAVG  480
AGPLNDGADV ANYTALMALA LGRLENLESF YRQADNLRQE TLHHMRRILT TRQTARCFLS  540
IGEYHRRLRA LSSLWASRPR ENFITAENVS PTGTEFQVIQ QSQQNQFSGF
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR05G14450.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1095200.0AK109520.1 Oryza sativa Japonica Group cDNA clone:002-113-G01, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015639062.20.0transcription factor TGAL5 isoform X6
RefseqXP_025881193.10.0transcription factor TGAL5 isoform X1
RefseqXP_025881197.10.0transcription factor TGAL5 isoform X11
SwissprotQ6F2N00.0TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBLA0A0D9WH290.0A0A0D9WH29_9ORYZ; Uncharacterized protein
STRINGLPERR05G14450.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-135bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]