PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00012.1.g05560.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 466aa    MW: 51875.2 Da    PI: 6.6918
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00012.1.g05560.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.82.8e-09172194325
                                     XXCHHHCHHHHHHHHHHHHHHHH CS
                          bZIP_1   3 elkrerrkqkNReAArrsRqRKk 25 
                                     ++k err+++NReAAr+sR+RKk
  Zjn_sc00012.1.g05560.1.sm.mkhc 172 DDKTERRLAQNREAARKSRLRKK 194
                                     589*******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.1E-7172240No hitNo description
PROSITE patternPS000360177192IPR004827Basic-leucine zipper domain
PfamPF141441.4E-29228303IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MVAGDSSGWQ VIMVELYHSA KHLELQPSDT ACFGELEKAL VHGTRDTSMI GSDVHAKAAG  60
YLAARPPTLE IFPSWPMSHL QQQYSGNSQS VGSSSGSSSG QNTMPQAELV SPLSTRADSG  120
HQHEALMMSV DDYNYGQGFG ATAATAPIFQ QHTAGQDKRR HESTRKDGKL LDDKTERRLA  180
QNREAARKSR LRKKGLFLGG CSGTGDMSSG AIMFDMEYAR WLDDESKHLT ELQGALQAQL  240
IDANLGVIVE DCMRHYDELF HLRAVLARSD VFHLMTGMWA TTAERCFLWM GGFRPSEILK  300
MLIPQLDPLT EQQLLGMCNL RQSSEQTEEA LVQGLQQLHQ SLADAVGAGP LDDGASLTNY  360
TGLMALALDR LDSLESFYRQ ADNLRQQALH HMRRILTTRQ TARCFLSIGE YHRRLRALSS  420
AWTSRPRENF VATENVSPTG TDQAILQHQH QHHQQQHHNQ SQFSGF
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004961926.10.0transcription factor TGAL5 isoform X1
RefseqXP_022680634.10.0transcription factor TGAL5 isoform X1
SwissprotQ6F2N00.0TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBLA0A0D9WH290.0A0A0D9WH29_9ORYZ; Uncharacterized protein
TrEMBLA0A368QHY50.0A0A368QHY5_SETIT; Uncharacterized protein
STRINGLPERR05G14450.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-111bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]