PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G16070.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 349aa    MW: 39289.4 Da    PI: 6.6293
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G16070.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.74e-1197146349
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeaeNkaLkkel 49 
                      + + err+++NReAAr+sR+RKka++++Le+   + +++e+e ++ ++++
  OPUNC05G16070.1  97 QQETERRLAQNREAARKSRLRKKAYVQQLETsriRLQQIEQELQRARSQV 146
                      56789************************973224455555544444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-695162IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.07197141IPR004827Basic-leucine zipper domain
PfamPF001705.8E-8100151IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.78E-7101145No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-8101145No hitNo description
PROSITE patternPS000360102117IPR004827Basic-leucine zipper domain
PfamPF141442.7E-29185259IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MLPNRIGLQY KSQREEAKKS GKAREGSQRE MKGYLAARPP TLEIFPSWPM SQLQEPYSNS  60
QSVGSTTDSS SAQNTMSQAE LVSPASMRSD SGQEQQQQET ERRLAQNREA ARKSRLRKKA  120
YVQQLETSRI RLQQIEQELQ RARSQVPTLR KPHKIATSNN TIVTKGAAMF DMEYTRWLDD  180
DSKCMAELQG ALQAQLPDGN LGAIVEECMR HYDELFHLRA VLASSDVFHL MTGMWAAPAE  240
RCFLWMAGFR PSEILKMLIP QLDPLTEQQL MGMCSLQQSS EQTEEALAQG LHQLHQSLAD  300
AVGGGPLNDG ADVANYTGLM ALALGRLENL ESFYRQKPHC DRECQPDRN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1095200.0AK109520.1 Oryza sativa Japonica Group cDNA clone:002-113-G01, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015639069.10.0transcription factor TGAL5 isoform X15
RefseqXP_015639070.10.0transcription factor TGAL5 isoform X15
SwissprotQ6F2N00.0TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBLA0A0E0L3410.0A0A0E0L341_ORYPU; Uncharacterized protein
STRINGOPUNC05G16070.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.28e-92bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]