PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2609
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Subtree rooted at node 153: /--------------- Do006082.1 [Dichanthelium oligosanthes] (2) | | /----- Pavir.6KG248200.1.p [Panicum virgatum] (22) /--76-+ /-100+ | | | \----- Pavir.6NG116700.1.p [Panicum virgatum] (27) | \-100+ /-76-+ \---------- Pahal.F02656.1 [Panicum hallii] (51) | | | | /----- Seita.6G145000.1.p [Setaria italica] (48) | \------100------+ /-50-+ \----- Sevir.6G150700.1.p [Setaria viridis] (50) | | | | /----- Sobic.007G126400.1.p [Sorghum bicolor] (5) | | | | \---------100--------+----- GRMZM2G122076_P01 [Zea mays] (30) | | | \----- GRMZM2G003304_P01 [Zea mays] (49) | | /----- Zmw_sc02141.1.g00100.1 [Zoysia matrella] (15) /-100+ /-97-+ | | | \----- Zpz_sc00102.1.g00020.1.sm.mkhc [Zoysia pacifica] (41) | | /-100+ | | | | /----- Zmw_sc01577.1.g00110.1 [Zoysia matrella] (68) | | | \-96-+ | | /--99-+ \----- Zjn_sc00091.1.g00660.1.sm.mkhc [Zoysia japonica] (69) | | | | | | | \--------------- Oropetium_20150105_02318A [Oropetium thomaeum] (43) | | | /------------80-----------+ \---100---+ /----- Zjn_sc00015.1.g00820.1.sm.mkhc [Zoysia japonica] (17) | | | /-72-+ | | | | \----- Zpz_sc03424.1.g00030.1.sm.mkhc [Zoysia pacifica] (29) | | \----100---+ | | \---------- Zmw_sc06690.1.g00030.1 [Zoysia matrella] (31) | | | | /---------- PH01000420G0650 [Phyllostachys heterocycla] (33) | | | | \------------98-----------+ /----- Bradi3g35850.1.p [Brachypodium distachyon] (38) | \-100+ | \----- Brast03G227900.1.p [Brachypodium stacei] (58) | | /----- GSMUA_Achr9P14570_001 [Musa acuminata] (3) | /---------80---------+ | | \----- GSMUA_Achr3P06190_001 [Musa acuminata] (18) | | | | /----- Aco023084.1 [Ananas comosus] (7) | | /------100------+ | | | \----- Aco000939.1 [Ananas comosus] (75) | | | | | | /----- GSMUA_Achr9P18360_001 [Musa acuminata] (14) | | | /-100+ | |-77-+ | \----- GSMUA_Achr8P25940_001 [Musa acuminata] (60) | | | /-80-+ | /-52-+ | | \---------- PEQU_03172 [Phalaenopsis equestris] (28) | | | | | | | | \--58-+ /----- PDK_30s793411g008 [Phoenix dactylifera] (71) | | | | /-91-+ | | | | | \----- XP_010913582.1 [Elaeis guineensis] (74) | | | \-97-+ | | | \---------- XP_010928608.1 [Elaeis guineensis] (77) | /---------93---------+ | | | | |-------------------------- PEQU_09386 [Phalaenopsis equestris] (55) | | | | | | | | /----- Zosma54g00840.1 [Zostera marina] (59) | | | \---------99---------+ | | | \----- Spipo12G0012000 [Spirodela polyrhiza] (63) | | | | | \------------------------------- GSMUA_Achr5P05300_001 [Musa acuminata] (32) | | | | /---------- BGIOSGA008976-PA [Oryza sativa indica] (4) | | | | | | /----- ORGLA02G0266600.1 [Oryza glaberrima] (35) | | |-83-+ | | | \----- OBART02G31160.1 [Oryza barthii] (62) --87-+ | | | | /-53-+---------- ONIVA02G34350.1 [Oryza nivara] (39) | | | | | | | |---------- LOC_Os02g49700.1 [Oryza sativa japonica] (42) | | | | | | /--66-+ |---------- OGLUM02G31840.1 [Oryza glumaepatula] (67) | | | | | | | | | \---------- ORUFI02G32840.1 [Oryza rufipogon] (79) | | /-95-+ | | | | | \--------------- KN538841.1_FGP010 [Oryza longistaminata] (56) | | | | | | /-94-+ \--------------------- OMERI02G30000.1 [Oryza meridionalis] (66) | | | | | /-100+ /-100+ \-------------------------- OPUNC02G28870.1 [Oryza punctata] (26) | | | | | | | | | \------------------------------- OB02G38180.1 [Oryza brachyantha] (83) | | | /-100+ | | | | | /----- PH01004993G0070 [Phyllostachys heterocycla] (46) | | | | \--------------100-------------+ | | | | \----- PH01000569G0270 [Phyllostachys heterocycla] (61) | | | | | | | | /--------------------- MLOC_5668.1 [Hordeum vulgare] (8) | | | | | | | | /-93-+ | /----- TRIUR3_23073-P1 [Triticum urartu] (20) | | | | | | /-100+ | | | | | /-100+ | \----- Traes_6BL_322DA92B5.1 [Triticum aestivum] (82) | | | | | | | /-61-+ | | | | | | | | | /----- EMT21095 [Aegilops tauschii] (76) | | | | | | | | \-83-+ | | | | | | \-100-+ \----- Traes_6DL_FF4C8C4AB.1 [Triticum aestivum] (80) | | | | \------100-----+ | | | | | | \--------------- Traes_6AL_36AB0312C.1 [Triticum aestivum] (86) | | | | | | | | | | /----- Bradi3g56180.1.p [Brachypodium distachyon] (10) | | | | \---------100--------+ | | | | \----- Brast04G050700.1.p [Brachypodium stacei] (23) | | | | | | | | /----- Sobic.004G251300.1.p [Sorghum bicolor] (6) | | | | /---------92---------+ | | \--91-+ | \----- GRMZM2G021339_P01 [Zea mays] (85) | | | | | | | | /----- Seita.1G306100.1.p [Setaria italica] (16) | | | | /---100---+ | | | /-100+ | \----- Sevir.1G312000.1.p [Setaria viridis] (81) \-76-+ | | | | | | | | /--97-+ /----- Pavir.1NG403300.1.p [Panicum virgatum] (21) | | | | | | /-100+ | | | | | | | \----- Pavir.1KG493900.1.p [Panicum virgatum] (72) | | | \-75-+ \-100+ | | | | \---------- Pahal.A03378.1 [Panicum hallii] (54) | | | | | | | \--------------------- Do009454.1 [Dichanthelium oligosanthes] (53) | | | | | | /----- Zmw_sc00950.1.g00170.1 [Zoysia matrella] (9) | | | /-98-+ | \------100-----+ | \----- Zjn_sc00022.1.g02500.1.sm.mkhc [Zoysia japonica] (12) | | /----100---+ | | | | /----- Zmw_sc00963.1.g00120.1 [Zoysia matrella] (52) | | | \-100+ | | | \----- Zpz_sc00235.1.g00210.1.sm.mkhc [Zoysia pacifica] (78) | | /-100+ | | | | /--------------- Oropetium_20150105_19150A [Oropetium thomaeum] (11) | | | | | | | | | | /----- Zjn_sc00007.1.g06000.1.sm.mkhc [Zoysia japonica] (25) | | | \--57-+ /-100+ | | | | | \----- Zmw_sc02087.1.g00150.1 [Zoysia matrella] (37) | \-100+ \-100+ | | | /----- Zpz_sc00363.1.g00270.1.sm.mkhc [Zoysia pacifica] (40) | | \-100+ | | \----- Zmw_sc03294.1.g00080.1 [Zoysia matrella] (44) | | | | /----- 462938999 [Eragrostis tef] (45) | \---------91---------+ | \----- 462898925 [Eragrostis tef] (57) | \--------------------------------------------------------- PH01000670G0190 [Phyllostachys heterocycla] (36) Root part of tree: /------------------------------------------------------------------- ONIVA08G15620.1 [Oryza nivara] (1) | |------------------------------------------------------------------- LOC_Os08g32080.1 [Oryza sativa japonica] (13) | |------------------------------------------------------------------- BGIOSGA026973-PA [Oryza sativa indica] (34) | |------------------------------------------------------------------- LOC_Os08g32085.1 [Oryza sativa japonica] (70) | |------------------------------------------------------------------- ORUFI08G16530.1 [Oryza rufipogon] (84) | | /--------------------------- (153) | | + /-----100----+ /------------- LPERR08G12050.1 [Leersia perrieri] (24) | | \------51-----+ | /-----100-----+ \------------- OB08G22310.1 [Oryza brachyantha] (87) | | | |-----100----+ \---------------------------------------- OPUNC08G13170.1 [Oryza punctata] (64) | | | \------------------------------------------------------ OMERI07G06640.1 [Oryza meridionalis] (19) | | /------------- ORGLA08G0128600.1 [Oryza glaberrima] (47) | /------55-----+ | | \------------- OBART08G14710.1 [Oryza barthii] (73) \-------------------95------------------+ \--------------------------- OGLUM08G15410.1 [Oryza glumaepatula] (65) |