PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2147
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Subtree rooted at node 159: /----- LPERR12G05920.2 [Leersia perrieri] (2) /------------63-----------+ | \----- OB12G16310.1 [Oryza brachyantha] (30) | | /-------------------------- OMERI12G04560.1 [Oryza meridionalis] (27) | | | | /----- OPUNC12G06450.1 [Oryza punctata] (38) /----72---+ | /-51-+ | | | | \----- OBART12G06770.1 [Oryza barthii] (59) | | | /-100+ | | | | \---------- OGLUM12G08090.1 [Oryza glumaepatula] (84) | | | | | \-96-+ | /----- ONIVA12G06500.1 [Oryza nivara] (41) | | |----74---+ | | | \----- BGIOSGA036419-PA [Oryza sativa indica] (43) | | /--57-+ | | | | /----- ORUFI12G07600.2 [Oryza rufipogon] (57) | | | |----99---+ | | | | \----- LOC_Os12g13170.1 [Oryza sativa japonica] (63) | | | | | \-59-+ \--------------- ORGLA12G0063500.1 [Oryza glaberrima] (73) | | | |--------------------- KN540736.1_FGP002 [Oryza longistaminata] (54) | | | \--------------------- AMDW01040228.1_FGP001 [Oryza longistaminata] (56) | | /---------- Zmw_sc01028.1.g00030.1 [Zoysia matrella] (3) | | | /---------100--------+ /----- Zpz_sc00694.1.g00030.1.am.mkhc [Zoysia pacifica] (20) | | \-70-+ | | \----- Zpz_sc01473.1.g00050.1.am.mkhc [Zoysia pacifica] (52) | | | | /----- Zjn_sc00010.1.g03170.1.am.mkhc [Zoysia japonica] (42) | | /-100+ | | | \----- Zmw_sc00079.1.g00370.1 [Zoysia matrella] (62) | /-100+ /-100+ | | | | \---------- Zpz_sc01481.1.g00030.1.am.mkhc [Zoysia pacifica] (93) | | | /-100-+ | | | | \--------------- Zmw_sc04929.1.g00070.1 [Zoysia matrella] (51) | | | /-91-+ | | | | \--------------------- Oropetium_20150105_10659A [Oropetium thomaeum] (66) | | \-56-+ | | | /----- 462944603 [Eragrostis tef] (49) | | \---------100--------+ /-66-+ | \----- 462849714 [Eragrostis tef] (76) | | | | |-90-+ /----- GRMZM2G074373_P01 [Zea mays] (5) | | | | | | | /-100+----- Sobic.008G083200.1.p [Sorghum bicolor] (24) | | | | | | | | /-70-+ \----- GRMZM2G088140_P02 [Zea mays] (71) | | | | | | | | | \---------- Pavir.3KG070200.1.p [Panicum virgatum] (6) | | | | | | | /--83-+ /----- Seita.3G090500.1.p [Setaria italica] (85) | | | | |---100---+ | | | | | \----- Sevir.3G092500.1.p [Setaria viridis] (96) | | \------100-----+ | | | | \--------------- Pahal.C00764.1 [Panicum hallii] (94) | | | | | \--------------------- Pavir.3NG057200.1.p [Panicum virgatum] (75) | | | | /--------------- TRIUR3_34165-P1 [Triticum urartu] (9) | | | /----50----+ | | /----- EMT28127 [Aegilops tauschii] (23) | | | /-100-+ /-76-+ | | | | | | \----- Traes_5DL_C794C1EEA.3 [Triticum aestivum] (70) | | | | \-100+ | | | | \---------- MLOC_63066.1 [Hordeum vulgare] (34) | | | /-100+ | | | | |--------------------- Traes_5AS_3A85F1C2C.3 [Triticum aestivum] (14) | | | | | | | | | | /----- Traes_5BL_A5532B750.1 [Triticum aestivum] (35) | | |------100-----+ \-------97------+ | | | | \----- Traes_5BS_A5532B750.1 [Triticum aestivum] (83) | | | | | | | | /----- Brast05G235700.1.p [Brachypodium stacei] (32) | | | \---------100--------+ | | | \----- Bradi4g39630.1.p [Brachypodium distachyon] (86) | | | | | | /----- PH01000940G0470 [Phyllostachys heterocycla] (77) | | \----------------100----------------+ | | \----- PH01001517G0230 [Phyllostachys heterocycla] (92) | | | \---------------------------------------------- Zosma174g00400.1 [Zostera marina] (31) | | /---------- Zpz_sc02442.1.g00040.1.am.mkhc [Zoysia pacifica] (4) | | | /-100+ /----- Zmw_sc00569.1.g00420.1 [Zoysia matrella] (47) | | \-100+ | /-100-+ \----- Zjn_sc00037.1.g05410.1.sm.mkhc [Zoysia japonica] (79) | | | | /-97-+ \--------------- Zmw_sc02110.1.g00050.1 [Zoysia matrella] (89) | | | | /-63-+ \--------------------- Oropetium_20150105_14249A [Oropetium thomaeum] (29) /-50-+ | | | | /-98-+ \-------------------------- 462903370 [Eragrostis tef] (74) | | | | | | | \------------------------------- 462853751 [Eragrostis tef] (17) | | | | | | /----- GRMZM2G019106_P01 [Zea mays] (21) | | | /-100+ | | | | \----- GRMZM2G164848_P01 [Zea mays] (67) | | /------100------+ /-99-+ | | | | | \---------- GRMZM2G153144_P01 [Zea mays] (72) | | | | /-100-+ | | | | | \--------------- Sobic.004G026700.1.p [Sorghum bicolor] (46) | | | | | | | | | | /----- Pahal.A00166.1 [Panicum hallii] (40) | | | \------100-----+ | | | | | /-100+----- Pavir.1KG032700.1.p [Panicum virgatum] (61) | | | | | | | | | | | \----- Pavir.1NG039900.1.p [Panicum virgatum] (78) | | | \----100---+ | | | | /----- Sevir.1G100300.1.p [Setaria viridis] (44) | | | \-100+ | | | \----- Seita.1G101000.1.p [Setaria italica] (90) | | | | | | /-------------------------- OPUNC02G01690.1 [Oryza punctata] (8) | | | | | | | | /----- OBART02G02250.1 [Oryza barthii] (10) | | | | /-55-+ | | | | | \----- ORGLA02G0021500.1 [Oryza glaberrima] (15) | | | | | | | | | |---------- ORUFI02G02260.1 [Oryza rufipogon] (19) | \-100+ | | --50-+ | /-88-+ |---------- BGIOSGA007448-PA [Oryza sativa indica] (65) | | | | /-100+ | | | | | |---------- LOC_Os02g03580.1 [Oryza sativa japonica] (82) | | | | | | | | | | | |---------- OGLUM02G02110.1 [Oryza glumaepatula] (91) | | | | /--66-+ | | | /-93-+ | | | \---------- ONIVA02G02170.1 [Oryza nivara] (95) | | | | | | | | | | | \-100+ \--------------- KN538736.1_FGP053 [Oryza longistaminata] (36) | | | | | | | /-100+ | \--------------------- OMERI02G02860.1 [Oryza meridionalis] (60) | | | | | | | | | \------------------------------- OB02G12150.1 [Oryza brachyantha] (12) | | | | | | | \------------------------------------ LPERR02G02050.1 [Leersia perrieri] (16) | | /-66-+ | | | | /----- Bradi3g02730.1.p [Brachypodium distachyon] (33) | | | | /-100+ | | | | | \----- Brast04G315700.1.p [Brachypodium stacei] (68) | | | \--------------100-------------+ | \-100-+ | /----- Traes_6BS_05264DAEA.2 [Triticum aestivum] (53) | | \-100+ | | \----- MLOC_81641.1 [Hordeum vulgare] (81) | | | \---------------------------------------------- PH01000280G0820 [Phyllostachys heterocycla] (88) | | /----- Aco029130.1 [Ananas comosus] (39) |---------------------------100--------------------------+ | \----- Aco013189.1 [Ananas comosus] (45) | \-------------------------------------------------------------- Aco015974.1 [Ananas comosus] (58) Root part of tree: /------------------------------------------------------------------- PDK_30s662081g001 [Phoenix dactylifera] (1) | |------------------------------------------------------------------- XP_010943442.1 [Elaeis guineensis] (69) | | /---------------------------------------------------- (159) | | | | /------- XP_010920014.1 [Elaeis guineensis] (7) | | /--100--+ | | | \------- PDK_30s909061g006 [Phoenix dactylifera] (11) | | /------100-----+ | | | | /------- PDK_30s917631g002 [Phoenix dactylifera] (26) | | | \--100--+ + | | \------- XP_010933407.1 [Elaeis guineensis] (48) | | | | /---60--+ /--72--+ /------- GSMUA_Achr6P01090_001 [Musa acuminata] (25) | | | | | /---80--+ | | | | | | \------- GSMUA_Achr4P27400_001 [Musa acuminata] (50) | | | | | /--61--+ | | | | | | \--------------- GSMUA_Achr4P18980_001 [Musa acuminata] (55) | | | | \--100--+ | | | /---50--+ \---------------------- GSMUA_Achr5P14150_001 [Musa acuminata] (64) | | | | | | | | | | /------- Zosma26g01050.1 [Zostera marina] (18) | | | | |--------------70-------------+ \--100-+ \--50--+ | \------- Spipo11G0011300 [Spirodela polyrhiza] (80) | | | | | \------------------------------------- PEQU_35719 [Phalaenopsis equestris] (22) | | | \--------------------------------------------- Spipo15G0039600 [Spirodela polyrhiza] (28) | | /------- GSMUA_Achr4P11610_001 [Musa acuminata] (13) | /--100--+ | | \------- GSMUA_Achr4P04530_001 [Musa acuminata] (87) \---------------------99---------------------+ \--------------- GSMUA_AchrUn_randomP02860_001 [Musa acuminata] (37) |