PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_81641.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 105aa MW: 12040.3 Da PI: 9.1912 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 73.9 | 2.2e-23 | 5 | 67 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elk+++rk +NRe+ArrsR+RK+ae+eeL +++++L++eN++L+ el+++kke+++l s++ MLOC_81641.1 5 ERELKKQKRKLSNRESARRSRLRKQAECEELGQRAEALKSENSSLRIELDRIKKEYEELLSKN 67 89***********************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-16 | 2 | 64 | No hit | No description |
SMART | SM00338 | 1.9E-20 | 5 | 69 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-21 | 5 | 67 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.875 | 7 | 70 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.44E-12 | 8 | 64 | No hit | No description |
CDD | cd14702 | 1.83E-14 | 10 | 60 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 12 | 27 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence Send to blast |
NIQDERELKK QKRKLSNRES ARRSRLRKQA ECEELGQRAE ALKSENSSLR IELDRIKKEY 60 EELLSKNTSL KAKLGETGGG DSVPDMNERG DTNGGSHHHQ QQQEP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 7 | 14 | LKKQKRKL |
2 | 21 | 27 | RRSRLRK |
3 | 21 | 28 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_81641.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK361858 | 1e-171 | AK361858.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1150N02. | |||
GenBank | AK364841 | 1e-171 | AK364841.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2028M07. | |||
GenBank | AK365578 | 1e-171 | AK365578.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2035D12. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020196572.1 | 9e-53 | uncharacterized protein LOC109782370 | ||||
Swissprot | P23922 | 1e-51 | HBP1A_WHEAT; Transcription factor HBP-1a | ||||
TrEMBL | A0A287TF05 | 9e-66 | A0A287TF05_HORVV; Uncharacterized protein | ||||
TrEMBL | A0A287TF09 | 1e-65 | A0A287TF09_HORVV; Uncharacterized protein | ||||
TrEMBL | A0A287TFD3 | 1e-65 | A0A287TFD3_HORVV; Uncharacterized protein | ||||
TrEMBL | A0A287TFE4 | 1e-65 | A0A287TFE4_HORVV; Uncharacterized protein | ||||
TrEMBL | F2DD91 | 8e-66 | F2DD91_HORVV; Predicted protein | ||||
STRING | MLOC_81641.1 | 6e-69 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2147 | 37 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32150.1 | 4e-30 | basic region/leucine zipper transcription factor 68 |
Publications ? help Back to Top | |||
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