PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_63066.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 341aa MW: 36680.1 Da PI: 8.832 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 66.3 | 5.2e-21 | 269 | 331 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NR +ArrsR+RK+ae+eeL++++++L++eN +Lk+e+++++ke+++l s++ MLOC_63066.1 269 ERELKRQKRKQSNRDSARRSRLRKQAECEELAQRAEVLKQENASLKDEVSRIRKEYDELLSKN 331 89**********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 1.6E-6 | 49 | 74 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 2.3E-36 | 118 | 243 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-18 | 263 | 328 | No hit | No description |
SMART | SM00338 | 5.2E-21 | 269 | 333 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.5E-20 | 269 | 331 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.082 | 271 | 334 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.19E-10 | 272 | 328 | No hit | No description |
CDD | cd14702 | 1.05E-22 | 274 | 325 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 276 | 291 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence Send to blast |
MRCWLLVVVV AAAMSTVIVL PEYEIINHLT KFLGLLCNRF TKMKETVKMP MMPPYGTPPY 60 VIYPPGGVYA HPSMRPGAHP FAPYAMSSSN GNPDATGTTT TPATAGGETN GKSSDGIEKS 120 PIKRSKGSLG SLNMITGKNC VEHGKTSGAS ANGTISQSGE SGSESSSEGS EANSQNDLQH 180 KESGQEQDGD VRSSQNGVSP SPSQAQLKQT SAIMQMPSSG PVPGPTTNLK IGMDYWANTA 240 SSSPALHGKV TPTAIPGDLA PTEPWMQDER ELKRQKRKQS NRDSARRSRL RKQAECEELA 300 QRAEVLKQEN ASLKDEVSRI RKEYDELLSK NSSLKDNIGD K |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 285 | 291 | RRSRLRK |
2 | 285 | 292 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00291 | DAP | Transfer from AT2G35530 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_63066.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK366562 | 0.0 | AK366562.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2044E07. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020189928.1 | 0.0 | bZIP transcription factor 16-like | ||||
Swissprot | B6E107 | 0.0 | BZP1B_WHEAT; bZIP transcription factor 1-B | ||||
TrEMBL | A0A3B6LIV0 | 0.0 | A0A3B6LIV0_WHEAT; BZip type transcription factor bZIP1 | ||||
TrEMBL | A0A446U0X8 | 0.0 | A0A446U0X8_TRITD; Uncharacterized protein | ||||
STRING | MLOC_63066.1 | 0.0 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2147 | 37 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 5e-76 | basic region/leucine zipper transcription factor 16 |
Publications ? help Back to Top | |||
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