PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P04530_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 413aa    MW: 43692.9 Da    PI: 6.0151
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P04530_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.33.1e-22300362163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            ++elkr+rrkq+NRe+ArrsR+RK+ae eeL++++++L +eN +L+ el ++k+e+++l s++
  GSMUA_Achr4P04530_001 300 DRELKRQRRKQSNRESARRSRLRKQAEYEELAQRADTLREENASLRAELTRIKEEYEQLLSQN 362
                            689*********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.8E-33198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.4E-47136273No hitNo description
Gene3DG3DSA:1.20.5.1703.2E-17294360No hitNo description
SMARTSM003386.4E-19300364IPR004827Basic-leucine zipper domain
PfamPF001709.8E-20301362IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.231302365IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-11303360No hitNo description
CDDcd147022.17E-24305355No hitNo description
PROSITE patternPS000360307322IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MGSSEADPSA KAPKTSAAQE QTPATSSTPA VTVYPDWSSF QAYSPIPPHG FFHSPVASNP  60
QPHPYMWGPQ HLMPPYGTPP PPYVMYPPGG LYSHPSMPPG AHPFNPYAMT SANSNVEASG  120
GAPGVEMDGK SSEGKERSPI RRSKGSLGSL NMITGKNNSE PGKTSAQPVN GAFSQSGESG  180
SESSSEGSDA NSQNDSHPKT TGGHESFGEA SQNGNSASGS QNGVTQMPSQ TTLSHPLSMV  240
PMSATVPGAI VGPTTNLNIG MDYWGAPSSS PVPVHGKIPA TAVGGAAVPG APSDLWLKDD  300
RELKRQRRKQ SNRESARRSR LRKQAEYEEL AQRADTLREE NASLRAELTR IKEEYEQLLS  360
QNTLLKEKIG EVKQGAEDQS LDGKEQCSGD DKPKRNLDSD AQAAETEQGQ SGV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1316322RRSRLRK
2316323RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009395314.10.0PREDICTED: bZIP transcription factor 16 isoform X1
RefseqXP_009395315.10.0PREDICTED: bZIP transcription factor 16 isoform X1
SwissprotA0A3B6KF131e-147BZP1A_WHEAT; bZIP transcription factor 1-A
SwissprotB6E1071e-147BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLM0SL200.0M0SL20_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P04530_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.15e-97basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]