PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01000280G0820 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | bZIP | ||||||||
Protein Properties | Length: 160aa MW: 17414.2 Da PI: 5.107 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 69.6 | 5e-22 | 56 | 118 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elk+++rkq+NRe+ArrsR+RK+ae+eeL++ +++L+aeN++L+ ele++kke+++l s++ PH01000280G0820 56 ERELKKQKRKQSNRESARRSRLRKQAECEELAQCAETLKAENSSLRAELERIKKEYEELLSQN 118 89**********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF16596 | 2.8E-9 | 1 | 35 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-15 | 54 | 117 | No hit | No description |
SMART | SM00338 | 1.8E-21 | 56 | 120 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.1E-20 | 56 | 118 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.794 | 58 | 121 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.31E-10 | 59 | 116 | No hit | No description |
CDD | cd14702 | 2.36E-20 | 61 | 111 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 63 | 78 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MSMVPIQSGA VIGGVAGPTT NLNIGMDYWG ATGSSPVAAI HGKAPSGSVR GEQWDERELK 60 KQKRKQSNRE SARRSRLRKQ AECEELAQCA ETLKAENSSL RAELERIKKE YEELLSQNAS 120 LKEKLGETSD SIPDMNEQND ANGSYHKQPD SDAQPDDAP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 78 | RRSRLRK |
2 | 72 | 79 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01000280G0820 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015626323.1 | 5e-87 | transcription factor HBP-1a | ||||
Refseq | XP_015626324.1 | 5e-87 | transcription factor HBP-1a | ||||
Swissprot | P23922 | 1e-74 | HBP1A_WHEAT; Transcription factor HBP-1a | ||||
TrEMBL | A0A0E0JV20 | 1e-86 | A0A0E0JV20_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC02G01690.2 | 2e-87 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2147 | 37 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32150.1 | 7e-33 | basic region/leucine zipper transcription factor 68 |
Publications ? help Back to Top | |||
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