PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00010.1.g03170.1.am.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 257aa MW: 27404.6 Da PI: 10.177 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.5 | 7.9e-10 | 196 | 220 | 1 | 25 |
XXXXCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKk 25 e+elkr++rkq+NRe+ArrsR+RK+ Zjn_sc00010.1.g03170.1.am.mkhc 196 ERELKRQKRKQSNRESARRSRLRKQ 220 89**********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 1.5E-25 | 1 | 104 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 2.2E-9 | 141 | 211 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.5E-7 | 191 | 222 | No hit | No description |
Pfam | PF00170 | 1.6E-7 | 196 | 220 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 7.23E-12 | 201 | 220 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 203 | 218 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MGSRGTDTPA KASKAPATQE QHPPASSSTS TPAVYPDWSS FQVNEHSQGY PPIPPHGFFP 60 SYVASSPQGH PYMWGGQPMI PPYGTPPAPY VMYPPGVYAH PSMPPGAHPF TPYANISPNG 120 TADASGAAGG ETDGKASEGK DKSPMKKSKG SLGSLNMLTG KSPTEQGKTS GASDNGAVSQ 180 RIRTPEEVGR NKMEDERELK RQKRKQSNRE SARRSRLRKQ VAGQESSQNL FWEMVGRRCL 240 RIGLPLKVSG GAEVGAT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 212 | 218 | RRSRLRK |
2 | 212 | 219 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00173 | DAP | Transfer from AT1G32150 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001131383.1 | 3e-81 | uncharacterized protein LOC100192709 | ||||
Refseq | XP_008672076.1 | 3e-81 | putative bZIP transcription factor superfamily protein isoform X1 | ||||
Refseq | XP_008672077.1 | 3e-81 | putative bZIP transcription factor superfamily protein isoform X1 | ||||
Swissprot | B6E107 | 3e-77 | BZP1B_WHEAT; bZIP transcription factor 1-B | ||||
TrEMBL | B4FCD1 | 8e-80 | B4FCD1_MAIZE; BZIP transcription factor 16 | ||||
STRING | GRMZM2G074373_P01 | 1e-80 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2147 | 37 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32150.1 | 2e-54 | basic region/leucine zipper transcription factor 68 |
Publications ? help Back to Top | |||
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