PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco013189.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 401aa    MW: 42681.9 Da    PI: 6.973
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco013189.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.91.9e-22290352163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN +L+ el++l+ke+++l s++
  Aco013189.1 290 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRADSLKEENASLRAELSRLRKEYDELLSQN 352
                  89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077778.6E-32196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.8E-44133265No hitNo description
Gene3DG3DSA:1.20.5.1705.8E-18287350No hitNo description
PfamPF001701.0E-20290352IPR004827Basic-leucine zipper domain
SMARTSM003388.4E-23290354IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.748292355IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.94E-11293350No hitNo description
CDDcd147023.11E-25295346No hitNo description
PROSITE patternPS000360297312IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MGGSETDSPA KAPKNSSAQE QQPVTTSASV APVYPDWSSF QAYSPIPPGF FHSPVASSPQ  60
AHPYMWGAQH MMPPYGTPTP YVMYPPGGLY AHPSMPPGTH PFSPYAMPPS NGNADVPGTT  120
PGSSDGKSSE GKEKSPLKRS KGSLGSLNMI TGKNNNDPGK TSGVSANGVF SQSGESGSDS  180
SSEGSDANSQ NDSQPKTGGG EESFDVENPQ SGNRAHGSQN GVTRSPSQGM LNQTMPMMPM  240
PVGGPTTNLN IGMDYWGPPT SAALPLIRGK VPTTAVGGAV VPAEHLIQDE RELKRQRRKQ  300
SNRESARRSR LRKQAECEEL AQRADSLKEE NASLRAELSR LRKEYDELLS QNTSLKEKLG  360
EMGGRKTDDP RVDRNEQNSG YNNHKELSES DAQIGKASQP *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1306312RRSRLRK
2306313RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020081373.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_020114609.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_020114610.10.0bZIP transcription factor 16-like isoform X1
SwissprotB6E1071e-152BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLA0A199VEL70.0A0A199VEL7_ANACO; Transcription factor HBP-1a
STRINGXP_008788461.11e-171(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-104basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]