PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P27400_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 411aa    MW: 44537.3 Da    PI: 5.4656
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P27400_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_164.32.1e-20299358160
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                            e+elkr+rrkq+NRe+ArrsR+RK+ae eeL+++v++L  eN aL+ e+e++kke+++l 
  GSMUA_Achr4P27400_001 299 ERELKRQRRKQSNRESARRSRLRKQAEYEELAQRVEALRDENAALQAEVEQIKKEYDALV 358
                            89******************************************************9885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.6E-26195IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165969.5E-36134262No hitNo description
Gene3DG3DSA:1.20.5.1706.2E-18292359No hitNo description
SMARTSM003382.3E-20299363IPR004827Basic-leucine zipper domain
PfamPF001701.4E-18299357IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.599301364IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-12302358No hitNo description
CDDcd147028.75E-23304355No hitNo description
PROSITE patternPS000360306321IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MGGREADTKG PRTSVALEHP PATSSSPSAA VYPEWSGFQA YPSIPPHGFF HSPVVSSPQA  60
HPYMWGAQHL LPPYGTPPPP YVMYPHGIYT QPSVPPGSQP FSPYAMTYPN GSAETCKSVP  120
AITEGDIKSS EGKERNSIQR LKGSLGSLNI IAGKNSNEPD KTSVAGDRVL SQSDSGSDDS  180
SEGSDAKSED DLEQKTRGKQ ELLDEISRNG TNGVITAPTW ATSHQTMPIM HMLPAGVPGV  240
VAGPTTNLSI GMDYWVSPTS AIPPEHGKVP AAAATGAMIS GALVGATEKV PSEIWQQDER  300
ELKRQRRKQS NRESARRSRL RKQAEYEELA QRVEALRDEN AALQAEVEQI KKEYDALVAL  360
NATLKERTGE TTKEKEDLII KERSHHADDN VQRNMDSDPP TGPSENNQID Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1315321RRSRLRK
2315322RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018680982.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
RefseqXP_018680983.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
RefseqXP_018680984.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
RefseqXP_018680985.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
SwissprotB6E1071e-114BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLM0SSK20.0M0SSK2_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P27400_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-78basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]