PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KN540736.1_FGP002 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 261aa MW: 28566.4 Da PI: 8.4513 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 69.4 | 5.5e-22 | 164 | 226 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN +L++e+++++ke+++l s++ KN540736.1_FGP002 164 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRAEVLKQENASLRDEVNRIRKEYDELLSKN 226 89**********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 3.0E-18 | 1 | 72 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 6.8E-13 | 74 | 138 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.8E-17 | 158 | 223 | No hit | No description |
Pfam | PF00170 | 1.6E-20 | 164 | 226 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 3.0E-21 | 164 | 228 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.415 | 166 | 229 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.63E-11 | 167 | 223 | No hit | No description |
CDD | cd14702 | 4.79E-23 | 169 | 220 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 171 | 186 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MGSSGADAPT KTSKASAPQE QQPPASSSTA TPAVYPDWAN FQGYPPIPPH GFFPSPVASS 60 PQGHPYMWGA QDSHHKESGQ EQDGEVRSSQ NGVSRSPSQA KLNQTMAIMP MPSSGPVPAP 120 TTNLNIGMDY WANTASSTPA IHGKATPTAA PGSMVPGEQW VQDERELKRQ RRKQSNRESA 180 RRSRLRKQAE CEELAQRAEV LKQENASLRD EVNRIRKEYD ELLSKNSSLK EKLEDKQHKT 240 DEAGVDNKLQ HSGDDSQKKG N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 180 | 186 | RRSRLRK |
2 | 180 | 187 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.2}. | |||||
UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.2}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KN540736.1_FGP002 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269|Ref.2}. | |||||
UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269|Ref.2}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | OSU04295 | 0.0 | U04295.1 Oryza sativa Nipponbare bZIP DNA-binding factor (osZIP-1a) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015619718.1 | 1e-132 | bZIP transcription factor 68 isoform X2 | ||||
Swissprot | A0A3B6KF13 | 1e-112 | BZP1A_WHEAT; bZIP transcription factor 1-A | ||||
Swissprot | A0A3B6MPP5 | 1e-112 | BZP1D_WHEAT; bZIP transcription factor 1-D | ||||
TrEMBL | A0A0E0FAQ2 | 1e-132 | A0A0E0FAQ2_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI12G04600.3 | 1e-133 | (Oryza meridionalis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2147 | 37 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 7e-48 | basic region/leucine zipper transcription factor 16 |
Publications ? help Back to Top | |||
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