PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_5BL_A5532B750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 388aa MW: 41323.3 Da PI: 6.8028 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 66 | 6.4e-21 | 291 | 353 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NR +ArrsR+RK+ae+eeL++++++L++eN +Lk+e+++++ke+++l s++ Traes_5BL_A5532B750.1 291 ERELKRQKRKQSNRDSARRSRLRKQAECEELAQRAEVLKQENASLKDEVSRIRKEYDELLSKN 353 89**********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 1.8E-31 | 1 | 96 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 2.1E-38 | 140 | 265 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.5E-19 | 285 | 350 | No hit | No description |
Pfam | PF00170 | 5.5E-20 | 291 | 353 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 5.2E-21 | 291 | 355 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.082 | 293 | 356 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.69E-10 | 294 | 350 | No hit | No description |
CDD | cd14702 | 4.22E-24 | 296 | 347 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 298 | 313 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 388 aa Download sequence Send to blast |
MGSSEAETPA KANKASAPQE QQPPATSSTA TPTVYPDWTS FQGYPPIPPH GFFPSPVVSN 60 PQGHPYMWGP QPMMPPYGTP PYVIYPPGGI YAHPSMRPGA HPFAPYTMTS PNGNPDAAGT 120 TITAATAGGE TNGKSSEGKE KSPIKRSKGS LGSLNMITGK NCVEHGKTSG ASANGTISQS 180 GESGSESSSE GSEANSQNDS QHKESGQEQD GDVRSSQNGV SPSPSQAQLK QTLAIMQMPS 240 SGPVPGPTTN LNIGMDYWAN TASSSPALHG KVTPTAIPGA VAPTEPWMQD ERELKRQKRK 300 QSNRDSARRS RLRKQAECEE LAQRAEVLKQ ENASLKDEVS RIRKEYDELL SKNSSLKDNV 360 GDKQHKTDEA GLDNKLQHSG DDSQKDTN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 307 | 313 | RRSRLRK |
2 | 307 | 314 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00291 | DAP | Transfer from AT2G35530 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FJ194457 | 0.0 | FJ194457.1 Triticum aestivum bZip type transcription factor bZIP1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020189928.1 | 0.0 | bZIP transcription factor 16-like | ||||
Swissprot | B6E107 | 0.0 | BZP1B_WHEAT; bZIP transcription factor 1-B | ||||
TrEMBL | A0A446U157 | 0.0 | A0A446U157_TRITD; Uncharacterized protein | ||||
STRING | Traes_5BL_A5532B750.1 | 0.0 | (Triticum aestivum) | ||||
STRING | Traes_5BS_A5532B750.1 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2147 | 37 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 7e-88 | basic region/leucine zipper transcription factor 16 |
Publications ? help Back to Top | |||
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