PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G019106_P01
Common NameLOC103654950, ZEAMMB73_267188
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 361aa    MW: 38205.4 Da    PI: 5.2286
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G019106_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1681.5e-21254316163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elk+++rkq+NRe+ArrsR+RK+ae+eeL +++++L +eN++L+ ele+++ke+++l s++
  GRMZM2G019106_P01 254 ERELKKQKRKQSNRESARRSRLRKQAECEELGQRAEALRSENSSLRAELERIRKEYEQLLSQN 316
                        89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.3E-27199IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.4E-19130236No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-16251315No hitNo description
PfamPF001706.6E-20254316IPR004827Basic-leucine zipper domain
SMARTSM003388.1E-21254318IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.265256319IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-10257314No hitNo description
CDDcd147028.65E-25259309No hitNo description
PROSITE patternPS000360261276IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MGSNDPNTPS KASKASEQDQ PPATTTSSGT ASVYPEWPSF QAYSAIPPHA FFPPTVAANP  60
QAHPYMWGAQ PIVPPYGTPP PPPYVMYPPG TVYAHPSTPP AMHPFGHYPM PTNGHAETHG  120
AAPSAPEMNG KSEPGRTSAP SANGITSHSE SGSESESEGS DDNSQNDSHS KDNDGKEDGN  180
SQNGMSYSGS QGVVNQTMAM LPMQPGAMVG GVPSSTAANL NIGVDYWAAP GSAAVPAAHG  240
KAPAGSARGD QWDERELKKQ KRKQSNRESA RRSRLRKQAE CEELGQRAEA LRSENSSLRA  300
ELERIRKEYE QLLSQNASLK EKLGAASSDS LPDMNEQNDG DGDGGYRKQP DSDGHQPGSE  360
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1270276RRSRLRK
2270277RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.974720.0cell culture| endosperm| meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G019106
Functional Description ? help Back to Top
Source Description
UniProtBinds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G019106_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008679976.10.0transcription factor HBP-1a isoform X1
RefseqXP_008679977.10.0transcription factor HBP-1a isoform X1
RefseqXP_008679979.10.0transcription factor HBP-1a isoform X1
SwissprotP239221e-134HBP1A_WHEAT; Transcription factor HBP-1a
TrEMBLK3YTP10.0K3YTP1_SETIT; Uncharacterized protein
STRINGGRMZM2G019106_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.11e-54basic region/leucine zipper transcription factor 68
Publications ? help Back to Top
  1. Tabata T,Nakayama T,Mikami K,Iwabuchi M
    HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat.
    EMBO J., 1991. 10(6): p. 1459-67
    [PMID:2026143]
  2. Tabata T, et al.
    A protein that binds to a cis-acting element of wheat histone genes has a leucine zipper motif.
    Science, 1989. 245(4921): p. 965-7
    [PMID:2772648]
  3. Mikami K, et al.
    Developmental and tissue-specific regulation of the gene for the wheat basic/leucine zipper protein HBP-1a(17) in transgenic Arabidopsis plants.
    Mol. Gen. Genet., 1995. 248(5): p. 573-82
    [PMID:7476857]
  4. Nakayama T,Okanami M,Meshi T,Iwabuchi M
    Dissection of the wheat transcription factor HBP-1a(17) reveals a modular structure for the activation domain.
    Mol. Gen. Genet., 1997. 253(5): p. 553-61
    [PMID:9065688]
  5. Okanami M,Meshi T,Tamai H,Iwabuchi M
    HALF-1, a bZIP-type protein, interacting with the wheat transcription factor HBP-1a contains a novel transcriptional activation domain.
    Genes Cells, 1996. 1(1): p. 87-99
    [PMID:9078369]