PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1561
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 111: /----- 909450 [Arabidopsis lyrata] (3) /--------------100-------------+ | \----- Araha.1373s0012.1.p [Arabidopsis halleri] (18) | | /--------------------- Cagra.3793s0014.1.p [Capsella grandiflora] (12) | | | | /----- Csa16g016620.1 [Camelina sativa] (35) | | /-72-+ /-75-+ /-95-+ | \----- Csa07g016030.1 [Camelina sativa] (50) | | | | /-100+ | | | | | \---------- Csa19g009880.1 [Camelina sativa] (49) | | /-78-+ \-100-+ | | | | \--------------- Csa01g007230.1 [Camelina sativa] (44) | | | | | | | \-------------------------- Bostr.15530s0001.1.p [Boechera stricta] (69) | \-78-+ | | /----- Carubv10003750m [Capsella rubella] (31) | | /-100+ /-77-+ | | \----- Cagra.1036s0073.1.p [Capsella grandiflora] (40) | | \---------98---------+ | | | /----- Csa08g006870.1 [Camelina sativa] (43) | | \-100+ | | \----- Csa13g017640.1 [Camelina sativa] (73) | | | | /----- 317484 [Arabidopsis lyrata] (13) | | /-93-+ | | | \----- Araha.5777s0002.1.p [Arabidopsis halleri] (27) /--97-+ \--------------100-------------+ | | \---------- AT3G06220.1 [Arabidopsis thaliana] (77) | | | | /----- Araha.13291s0004.1.p [Arabidopsis halleri] (11) | | /-100+ | | | \----- 317478 [Arabidopsis lyrata] (67) | | /-100+ | | | \---------- AT3G06160.2 [Arabidopsis thaliana] (30) | \--------------54--------------+ | | /----- 339541 [Arabidopsis lyrata] (21) /-62-+ \----77---+ | | \----- Araha.38479s0010.1.p [Arabidopsis halleri] (53) | | | | /----- XP_009138290.1 [Brassica rapa] (24) | | /-100+ | | | \----- XP_009138285.1 [Brassica rapa] (62) | | /-100+ /-65-+ | | \---------- RrC1373_p1 [Raphanus raphanistrum] (34) | | | /--61-+ | | | | \--------------- RrC21530_p1 [Raphanus raphanistrum] (72) | | \--------------75--------------+ | | \--------------------- KFK30083.1 [Arabis alpina] (64) --100+ | | | /----- AA10G00493 [Aethionema arabicum] (52) | \------------------------100------------------------+ | \----- AA46G00132 [Aethionema arabicum] (55) | \-------------------------------------------------------------- XP_009130366.1 [Brassica rapa] (63) Subtree rooted at node 141: /-------------------------- (111) | | /----- XP_010530782.1 [Tarenaya hassleriana] (9) | /------100------+ /-100+ | \----- XP_010530864.1 [Tarenaya hassleriana] (20) | | | | | | /----- Gh_D09G0836 [Gossypium hirsutum] (23) | \-99-+ /---100---+ | | | \----- Thecc1EG006281t1 [Theobroma cacao] (66) | | | | \-100-+ /----- Ciclev10028843m [Citrus clementina] (26) | | /-100+ | | | \----- orange1.1g020807m [Citrus sinensis] (71) /-100+ \-82-+ | | \---------- Eucgr.I01213.1.p [Eucalyptus grandis] (33) | | | | /----- AA36G00045 [Aethionema arabicum] (25) | | /-100+ | | | \----- AA36G00041 [Aethionema arabicum] (79) /-98-+ | /-93-+ | | | | \---------- AA124G00010 [Aethionema arabicum] (47) | | \------100------+ | | \--------------- AA36G00042 [Aethionema arabicum] (39) | | | \------------------------------------ KFK34581.1 [Arabis alpina] (15) | | /----- Cagra.0612s0056.1.p [Capsella grandiflora] (5) | /---------100--------+ | | \----- Carubv10019277m [Capsella rubella] (65) | | | | /---------- Csa04g039340.1 [Camelina sativa] (14) | | | /-100+ | /----98----+ /----- Csa06g027770.1 [Camelina sativa] (38) | | | | \-81-+ | | | | \----- Csa09g061600.1 [Camelina sativa] (58) | | | | | | | | /----- Csa16g003510.1 [Camelina sativa] (17) | | /-80-+-100+ /-100+ | | | | | | \----- Csa05g093540.1 [Camelina sativa] (19) | | | | | /-100+ | | | | | | | /----- Csa07g003280.1 [Camelina sativa] (28) | | | | | | \-91-+ | | | | \--88-+ \----- Csa06g052160.1 [Camelina sativa] (56) | | | | | /--62-+ \---100---+ | \--------------- Csa09g062510.1 [Camelina sativa] (74) | | | | | | | \-------------------------- Bostr.11793s0064.1.p [Boechera stricta] (60) | | | | | | /----- Araha.11825s0002.1.p [Arabidopsis halleri] (36) | | | /-100+ | | | | \----- 906718 [Arabidopsis lyrata] (78) /-53-+ | \---------100--------+ | | | \---------- AT3G53310.1 [Arabidopsis thaliana] (48) | | | | | | /----- Thhalv10000999m [Eutrema salsugineum] (4) | | \-------------------73-------------------+ /-70-+ | \----- Thhalv10010633m [Eutrema salsugineum] (51) | | | | | \---------------------------------------------------- Tp5g09020 [Thellungiella parvula] (61) --100+ | | \--------------------------------------------------------- Thhalv10014972m [Eutrema salsugineum] (80) | \-------------------------------------------------------------- 676731720 [Sisymbrium irio] (54) Root part of tree: /------------------------------------------------------------------- GSBRNA2T00071510001 [Brassica napus] (1) | |------------------------------------------------------------------- XP_009138339.1 [Brassica rapa] (7) | | /-------- GSBRNA2T00082729001 [Brassica napus] (2) | /---97---+ | | \-------- XP_013627737.1 [Brassica oleracea] (59) | | | /---98--+----------------- Rsa1.0_01884.1_g00006.1 [Raphanus sativus] (8) | | | | | \----------------- RrC6180_p1 [Raphanus raphanistrum] (29) | /---58--+ + | | /-------- RrC31634_p1 [Raphanus raphanistrum] (10) | | \-------82-------+ | /-----------100-----------+ \-------- Rsa1.0_30273.1_g00001.1 [Raphanus sativus] (46) | | | | | \--------------------------------- Rsa1.0_23792.1_g00001.1 [Raphanus sativus] (32) | | | | /--------------------------------- (141) | | | | | | /-------- Rsa1.0_01134.1_g00008.1 [Raphanus sativus] (22) | | /---100--+ /-------100------+ | | | | | \-------- RrC3475_p2 [Raphanus raphanistrum] (75) | | | | | \--100--+ | \--100--+ /-------- XP_009116025.1 [Brassica rapa] (41) | | | /---100--+ | | | | \-------- GSBRNA2T00129473001 [Brassica napus] (70) | /---88--+ \--100--+ | | | \----------------- XP_013603807.1 [Brassica oleracea] (45) | | | | | | /----------------- GSBRNA2T00053767001 [Brassica napus] (37) | | | | | | \-----------100----------+ /-------- Rsa1.0_00173.1_g00029.1 [Raphanus sativus] (42) \---84---+ \---100--+ | \-------- RrC23829_p1 [Raphanus raphanistrum] (57) | | /-------- GSBRNA2T00062879001 [Brassica napus] (6) | /---100--+ | | \-------- XP_009103858.1 [Brassica rapa] (68) \---------------100--------------+ | /-------- XP_013590762.1 [Brassica oleracea] (16) \---89---+ \-------- GSBRNA2T00071286001 [Brassica napus] (76) |