PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP1904
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Subtree rooted at node 171: /----- Pavir.5KG215000.1.p [Panicum virgatum] (2) /-100+ | \----- Pavir.1KG121100.1.p [Panicum virgatum] (62) /-100+ | \---------- Pavir.5NG209800.1.p [Panicum virgatum] (34) /-100-+ | \--------------- Pahal.E03217.1 [Panicum hallii] (57) /-91-+ | | /----- Seita.5G030500.1.p [Setaria italica] (5) | \------100------+ /-100+ \----- Sevir.5G029100.1.p [Setaria viridis] (80) | | | \-------------------------- Do029712.1 [Dichanthelium oligosanthes] (31) /-100+ | | /----- GRMZM2G021276_P02 [Zea mays] (17) | \-----------100-----------+ | \----- Sobic.003G140100.1.p [Sorghum bicolor] (93) | | /----- Zmw_sc00178.1.g00200.1 [Zoysia matrella] (6) | /-100+ | | \----- Zjn_sc00011.1.g08140.1.am.mk [Zoysia japonica] (20) | /-100+ /---------77---------+ | | /----- Zpz_sc00056.1.g00180.1.am.mk [Zoysia pacifica] (8) | | | \-100+ | | | \----- Zmw_sc00020.1.g00290.1 [Zoysia matrella] (73) | | /--95-+ | | | | /----- Zpz_sc01433.1.g00120.1.am.mk [Zoysia pacifica] (10) | | | | /-74-+ | | | | | \----- Zmw_sc02474.1.g00070.1 [Zoysia matrella] (13) | | | \-100+ | \------89------+ | /----- Zmw_sc02098.1.g00080.1 [Zoysia matrella] (38) | | \-99-+ | | \----- Zjn_sc00005.1.g02740.1.sm.mk [Zoysia japonica] (54) | | | \--------------------- Oropetium_20150105_22939A [Oropetium thomaeum] (26) | | /----- OB04G30880.1 [Oryza brachyantha] (3) | /----84---+ | | \----- LPERR04G19640.1 [Leersia perrieri] (12) | | | | /----- ORUFI04G25690.1 [Oryza rufipogon] (14) | | /-100+ | | | \----- LOC_Os04g51070.1 [Oryza sativa japonica] (72) | | | | /-100-+ |---------- OBART04G23950.1 [Oryza barthii] (29) | | | | | | | |---------- ORGLA04G0205200.1 [Oryza glaberrima] (37) | | | | | | | |---------- OGLUM04G23900.1 [Oryza glumaepatula] (47) | | | | | | \-100+---------- BGIOSGA014424-PA [Oryza sativa indica] (58) | | | | /---100---+ |---------- KN538873.1_FGP012 [Oryza longistaminata] (87) | | | | | | | |---------- OMERI04G19830.1 [Oryza meridionalis] (89) | | | | | | | |---------- ONIVA04G23100.1 [Oryza nivara] (90) | | | | | | | \---------- OPUNC04G21480.1 [Oryza punctata] (96) | | | | | \--------------------- PH01000225G0520 [Phyllostachys heterocycla] (32) | | | /-88-+ /---------- Traes_2AL_6FC5F1FD0.1 [Triticum aestivum] (19) | | | | | | | /-77-+ /----- Traes_2DL_9DD224B48.1 [Triticum aestivum] (48) | | | | \-100+ | | | /-100-+ \----- EMT07628 [Aegilops tauschii] (71) | | | | | | | | /-64-+ \--------------- Traes_2BL_D3FAA4D64.2 [Triticum aestivum] (65) | | | | | | | | | \--------------------- Traes_2AL_FAB4B4A20.2 [Triticum aestivum] (33) | | \-99-+ | | | /----- Brast09G193000.1.p [Brachypodium stacei] (64) | /-100+ \---------100--------+ | | | \----- Bradi5g20397.2.p [Brachypodium distachyon] (68) | | | | | | /--------------------- Do000066.1 [Dichanthelium oligosanthes] (36) | | | | | | | | /----- Pavir.7NG324600.1.p [Panicum virgatum] (46) /-65-+ | | | /-100+ | | | | /-100+ | \----- Pavir.7NG318200.1.p [Panicum virgatum] (53) | | | | | | /-100+ | | | | | | | \---------- Pahal.G02166.1 [Panicum hallii] (56) | | | | | \--99-+ | | | \---100---+ | /----- Seita.7G222500.1.p [Setaria italica] (51) | | | | \---100---+ | | | | \----- Sevir.7G234200.1.p [Setaria viridis] (74) | | | | | | | \-------------------------- Oropetium_20150105_01578A [Oropetium thomaeum] (86) | | | | | /-100+ /---------- Traes_6BL_600E4507F.19 [Triticum aestivum] (4) | | | | | | | | | /-93-+ /----- EMT05766 [Aegilops tauschii] (28) | | | | | \-100+ | | | | /--89-+ \----- Traes_6DL_493269065.2 [Triticum aestivum] (39) | | | | | | | | | | /---100---+ \--------------- TRIUR3_08191-P1 [Triticum urartu] (41) | | | | | | | | | | | \--------------------- Traes_6AL_1688E9E0A.2 [Triticum aestivum] (75) | | | | | | | | | | /----- AC233960.1_FGP005 [Zea mays] (7) | | | | | /---100---+ | | | | | | \----- Sobic.004G270900.3.p [Sorghum bicolor] (69) | | | | | | | | | | | /-100-+ /----- Pavir.1KG464200.1.p [Panicum virgatum] (49) | | | | | | | /-100+ | | | | | | | | \----- Pavir.1NG441300.1.p [Panicum virgatum] (94) | | | \---100---+ | \-100+ | | | | /-100+ \---------- Pahal.A03049.1 [Panicum hallii] (82) | | | | | | | | | | | | /---------- Do015133.1 [Dichanthelium oligosanthes] (24) | | | | | | | | | | | | \----100---+ /----- Seita.1G285400.1.p [Setaria italica] (45) | | | | | \-100+ | | /-100-+ | | \----- Sevir.1G290800.1.p [Setaria viridis] (63) | | | | | | | | | | | | /----- Zmw_sc00647.1.g00460.1 [Zoysia matrella] (23) | | | | | | /-100+ | | | | \-100+ | \----- Zpz_sc01511.1.g00060.1.sm.mkhc [Zoysia pacifica] (52) | | | | | /-100+ | | | | | | | /----- Zjn_sc00022.1.g04320.1.sm.mkhc [Zoysia japonica] (60) | | | | | | \-100+ | | | | | | \----- Zmw_sc04648.1.g00090.1 [Zoysia matrella] (66) | | | | | /-100-+ | | | | | | | /----- Zmw_sc03507.1.g00070.1 [Zoysia matrella] (30) | | | | | | | /-100+ --82-+ | | | | | | | \----- Zpz_sc01827.1.g00080.1.am.mkhc [Zoysia pacifica] (59) | | | | \-100+ \-100+ | | | | | \---------- Zjn_sc00007.1.g07890.1.am.mkhc [Zoysia japonica] (70) | | | | | | | | | \--------------------- Oropetium_20150105_19340A [Oropetium thomaeum] (92) | | | | | | | | /----- Zosma123g00440.1 [Zostera marina] (22) | | | | /-89-+ | | | | | \----- GSMUA_Achr6P01160_001 [Musa acuminata] (42) | | | | /-90-+ | \-100+ | | | /----- PDK_30s668421g002 [Phoenix dactylifera] (79) | | | | \-100+ | | \--------------100-------------+ \----- XP_010918188.1 [Elaeis guineensis] (88) | | | | | \--------------- Aco017264.1 [Ananas comosus] (40) | | | |---------------------------------------------------- Spipo6G0020000 [Spirodela polyrhiza] (11) | | | | /----- XP_010938283.1 [Elaeis guineensis] (15) | | /-100+ | | | \----- XP_010938284.1 [Elaeis guineensis] (21) | | /-100+ | | | \---------- PDK_30s1207141g005 [Phoenix dactylifera] (25) | | /-100-+ | | | \--------------- GSMUA_Achr1P25000_001 [Musa acuminata] (50) | | /-100+ | | | | /----- Aco021988.1 [Ananas comosus] (27) | | | \------100------+ | |------------77-----------+ \----- Aco023519.1 [Ananas comosus] (84) | | | | | \-------------------------- PEQU_37291 [Phalaenopsis equestris] (18) | | | \---------------------------------------------------- Zosma467g00090.1 [Zostera marina] (44) | | /---------- OGLUM01G13750.1 [Oryza glumaepatula] (16) | | | | /----- ORUFI01G13250.1 [Oryza rufipogon] (35) | | | | |-100+----- ONIVA01G14500.1 [Oryza nivara] (76) | /-100+ | | | | \----- LOC_Os01g18870.1 [Oryza sativa japonica] (85) | | | | | | /----- ORGLA01G0103700.1 [Oryza glaberrima] (43) | | \-100+ | /-100-+ \----- OBART01G12290.1 [Oryza barthii] (91) | | | | | |--------------- OPUNC01G11990.1 [Oryza punctata] (77) \-------------------99-------------------+ | | \--------------- OB01G22030.1 [Oryza brachyantha] (83) | \--------------------- LPERR01G11210.1 [Leersia perrieri] (81) Root part of tree: /------------------------------------------------------------------- Traes_7DS_B8013B22B.1 [Triticum aestivum] (1) | |------------------------------------------------------------------- Traes_7AS_2B4EC601B.1 [Triticum aestivum] (55) | |------------------------------------------------------------------- EMT16792 [Aegilops tauschii] (61) | +------------------------------------------------------------------- TRIUR3_32308-P1 [Triticum urartu] (67) | |------------------------------------------------------------------- MLOC_71056.1 [Hordeum vulgare] (95) | | /--------------------------------------------- (171) | | \---------100---------+ /---------------------- Brast01G287300.1.p [Brachypodium stacei] (9) \----------100---------+ \---------------------- Bradi2g11260.1.p [Brachypodium distachyon] (78) |