PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2BL_D3FAA4D64.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 318aa    MW: 34903 Da    PI: 4.643
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2BL_D3FAA4D64.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.53.6e-06266293330
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                            +a+ + Er RR+++N ++ +Lr l P++
  Traes_2BL_D3FAA4D64.2 266 KANFATERERREQLNVKYKTLRMLFPNP 293
                            68899*********************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MIVGGDYFEG SHDHNLMTGS LTHDSSLAPK CNDNTNIELQ RFKVQSFSAD ILSDSTNLSS  60
EAARAINHLQ HQLGIGLEQD MPPVGTATWD TSICTIQDQI INHQLSEDPQ NILVQQQIQQ  120
YDAALYPNSG YTPAPDLLNL LHCTVAPVFP ATASVFGDTA LSGDTNYLDL NGEFTGVAAI  180
PDSGLMYTSD PALQLGYHAA QSHALKDICH SLPQNYGLFP SEDERDVMLG VGSVGGDLFQ  240
DIDDRQFDTV LEGRRGKGEF GKGKGKANFA TERERREQLN VKYKTLRMLF PNPTKVCLVH  300
HFAHLGELMI IDVQNSQL
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in the regulation of tapetum programmed cell death (PCD) and degradation during male reproductive development (PubMed:23519457, PubMed:23385589). Interacts with TDR and promote tapetal PCD by regulating the expression of RTS, and the two lipid-transfer proteins C4 and C6, which function in microspore development (PubMed:23519457). Acts downstream from and interacts with TDR in the regulation of tapetal PCD. Regulates directly the aspartic protease AP25 and AP37 during tapetal PCD (PubMed:23385589). May not target the cysteine protease CP1 (PubMed:23519457, PubMed:23385589). {ECO:0000269|PubMed:23385589, ECO:0000269|PubMed:23519457}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ3909901e-137HQ390990.1 Triticum aestivum clone UCDTA01441 genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020152149.10.0transcription factor EAT1-like
SwissprotQ7X8R01e-154EAT1_ORYSJ; Transcription factor EAT1
TrEMBLA0A3B6CCC80.0A0A3B6CCC8_WHEAT; Uncharacterized protein
STRINGTraes_2BL_D3FAA4D64.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19043796
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]