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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_2BL_D3FAA4D64.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
bHLH |
Protein Properties |
Length: 318aa MW: 34903 Da PI: 4.643 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_2BL_D3FAA4D64.2 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 18.5 | 3.6e-06 | 266 | 293 | 3 | 30 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
HLH 3 rahnerErrRRdriNsafeeLrellPka 30
+a+ + Er RR+++N ++ +Lr l P++
Traes_2BL_D3FAA4D64.2 266 KANFATERERREQLNVKYKTLRMLFPNP 293
68899*********************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MIVGGDYFEG SHDHNLMTGS LTHDSSLAPK CNDNTNIELQ RFKVQSFSAD ILSDSTNLSS 60 EAARAINHLQ HQLGIGLEQD MPPVGTATWD TSICTIQDQI INHQLSEDPQ NILVQQQIQQ 120 YDAALYPNSG YTPAPDLLNL LHCTVAPVFP ATASVFGDTA LSGDTNYLDL NGEFTGVAAI 180 PDSGLMYTSD PALQLGYHAA QSHALKDICH SLPQNYGLFP SEDERDVMLG VGSVGGDLFQ 240 DIDDRQFDTV LEGRRGKGEF GKGKGKANFA TERERREQLN VKYKTLRMLF PNPTKVCLVH 300 HFAHLGELMI IDVQNSQL
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in the regulation of tapetum programmed cell death (PCD) and degradation during male reproductive development (PubMed:23519457, PubMed:23385589). Interacts with TDR and promote tapetal PCD by regulating the expression of RTS, and the two lipid-transfer proteins C4 and C6, which function in microspore development (PubMed:23519457). Acts downstream from and interacts with TDR in the regulation of tapetal PCD. Regulates directly the aspartic protease AP25 and AP37 during tapetal PCD (PubMed:23385589). May not target the cysteine protease CP1 (PubMed:23519457, PubMed:23385589). {ECO:0000269|PubMed:23385589, ECO:0000269|PubMed:23519457}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ390990 | 1e-137 | HQ390990.1 Triticum aestivum clone UCDTA01441 genomic sequence. |