PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for
Capsella grandiflora
C3H Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- Cagra.0807s0009.1.p/142-165   (1)
      |                                                                               
      |------------------------------------------------------------------- Cagra.0248s0008.1.p/203-227   (48)
      |                                                                               
      |                                                          /-------- Cagra.1211s0017.1.p/105-129   (2)
      |                                 /-----------73-----------+                    
      |                                 |                        \-------- Cagra.3957s0020.1.p/92-115    (46)
      |                                 |                                             
      |                                 |                        /-------- Cagra.2991s0039.1.p/112-134   (4)
      |                                 |-----------100----------+                    
      |                                 |                        \-------- Cagra.0664s0084.1.p/132-154   (47)
      |                                 |                                             
      |                                 |--------------------------------- Cagra.1111s0013.1.p/273-298   (9)
      |                                 |                                             
      |                                 |--------------------------------- Cagra.0338s0020.1.p/90-113    (14)
      |                                 |                                             
      |                                 |                        /-------- Cagra.8005s0013.1.p/209-234   (15)
      |                                 |-----------99-----------+                    
      |                                 |                        \-------- Cagra.0430s0043.1.p/212-237   (91)
      |                                 |                                             
      |                                 |                        /-------- Cagra.3957s0020.1.p/268-293   (17)
      |                                 |               /---99---+                    
      |                                 |               |        \-------- Cagra.0993s0051.1.p/152-177   (40)
      |                                 |-------97------+                             
      |                                 |               \----------------- Cagra.1211s0017.1.p/271-297   (83)
      |                                 |                                             
      |                                 |                        /-------- Cagra.8004s0002.1.p/249-273   (20)
      |                                 |-----------98-----------+                    
      |                                 |                        \-------- Cagra.1111s0013.1.p/236-260   (90)
      |                                 |                                             
      |                                 |--------------------------------- Cagra.9128s0003.1.p/117-143   (21)
      |                                 |                                             
      |                                 |                        /-------- Cagra.0495s0060.1.p/124-144   (22)
      |                        /---52---+       /-------70-------+                    
      |                        |        |       |                \-------- Cagra.9070s0001.1.p/124-144   (42)
      |                        |        |       |                                     
      |                        |        |       |                /-------- Cagra.1535s0020.1.p/301-321   (24)
      |                        |        |       |       /---95---+                    
      |                        |        |       |       |        \-------- Cagra.13389s0004.1.p/306-326  (57)
      |                        |        |       |       |                             
      |                        |        |       |       |        /-------- Cagra.2495s0002.1.p/260-280   (49)
      |                        |        |       |---73--+---91---+                    
      |                        |        |---84--+       |        \-------- Cagra.0925s0010.1.p/256-276   (98)
      |                        |        |       |       |                             
      |                        |        |       |       \----------------- Cagra.0891s0057.1.p/254-274   (88)
      |                        |        |       |                                     
      |                        |        |       |------------------------- Cagra.8929s0001.1.p/116-136   (25)
      |                        |        |       |                                     
      |                        |        |       |------------------------- Cagra.2925s0033.1.p/100-119   (32)
      |                        |        |       |                                     
      |                        |        |       |                /-------- Cagra.0897s0006.1.p/127-150   (59)
      |                        |        |       \-------84-------+                    
      |                        |        |                        \-------- Cagra.0381s0001.1.p/90-114    (81)
      |                        |        |                                             
      |                        |        |                        /-------- Cagra.8005s0013.1.p/40-63     (43)
      |                        |        |-----------97-----------+                    
      |                        |        |                        \-------- Cagra.0430s0043.1.p/38-61     (60)
      |                        |        |                                             
      |                        |        |--------------------------------- Cagra.2622s0030.1.p/7-31      (53)
      |                        |        |                                             
      |                        |        \--------------------------------- Cagra.1211s0017.1.p/192-206   (71)
      |                /---74--+                                                      
      |                |       |                                 /-------- Cagra.0808s0019.1.p/1780-1803 (7)
      |                |       |----------------74---------------+                    
      |                |       |                                 \-------- Cagra.0926s0077.1.p/1269-1290 (30)
      |                |       |                                                      
      |                |       |                                 /-------- Cagra.0094s0010.1.p/117-138   (16)
      |                |       |----------------98---------------+                    
      +                |       |                                 \-------- Cagra.2248s0023.1.p/106-128   (78)
      |                |       |                                                      
      |                |       |                        /----------------- Cagra.3568s0002.1.p/57-78     (38)
      |                |       |                        |                             
      |                |       |-----------87-----------+        /-------- Cagra.1681s0032.1.p/231-250   (67)
      |                |       |                        \---61---+                    
      |                |       |                                 \-------- Cagra.1569s0001.1.p/430-450   (74)
      |                |       |                                                      
      |       /---50---+       |                                 /-------- Cagra.10427s0037.1.p/392-413  (39)
      |       |        |       |                        /---99---+                    
      |       |        |       |                        |        \-------- Cagra.1961s0021.1.p/361-383   (82)
      |       |        |       |-----------63-----------+                             
      |       |        |       |                        \----------------- Cagra.1195s0020.1.p/105-125   (73)
      |       |        |       |                                                      
      |       |        |       |------------------------------------------ Cagra.1914s0035.1.p/138-158   (52)
      |       |        |       |                                                      
      |       |        |       |------------------------------------------ Cagra.1004s0006.1.p/145-165   (72)
      |       |        |       |                                                      
      |       |        |       |------------------------------------------ Cagra.1968s0078.1.p/198-223   (92)
      |       |        |       |                                                      
      |       |        |       \------------------------------------------ Cagra.0799s0006.1.p/3-26      (99)
      |       |        |                                                              
      |       |        |                                         /-------- Cagra.0248s0008.1.p/160-181   (80)
      |       |        \--------------------82-------------------+                    
      |       |                                                  \-------- Cagra.0807s0009.1.p/98-118    (97)
      |       |                                                                       
      |       |                                                  /-------- Cagra.0434s0021.1.p/289-312   (3)
      |       |------------------------96------------------------+                    
      |       |                                                  \-------- Cagra.1194s0020.1.p/275-301   (77)
      |       |                                                                       
      |       |                                                  /-------- Cagra.1194s0020.1.p/41-67     (5)
      |       |------------------------66------------------------+                    
      |       |                                                  \-------- Cagra.0434s0021.1.p/46-71     (29)
      |       |                                                                       
      |       |                                                  /-------- Cagra.1671s0119.1.p/94-118    (6)
      |       |                                 /-------96-------+                    
      |       |                                 |                \-------- Cagra.0301s0088.1.p/91-115    (70)
      |       |                                 |                                     
      |       |----------------51---------------+                /-------- Cagra.0301s0088.1.p/265-290   (13)
      |       |                                 |       /---95---+                    
      |       |                                 |       |        \-------- Cagra.1671s0119.1.p/265-288   (19)
      |       |                                 \---59--+                             
      |       |                                         \----------------- Cagra.5647s0054.1.p/135-158   (96)
      |       |                                                                       
      |       |----------------------------------------------------------- Cagra.0922s0006.1.p/150-174   (8)
      |       |                                                                       
      |       |                                                  /-------- Cagra.1671s0119.1.p/49-74     (10)
      |       |------------------------95------------------------+                    
      |       |                                                  \-------- Cagra.0301s0088.1.p/45-70     (62)
      |       |                                                                       
      |       |                                                  /-------- Cagra.0434s0021.1.p/139-163   (11)
      |       |------------------------96------------------------+                    
      |       |                                                  \-------- Cagra.1194s0020.1.p/134-158   (34)
      |       |                                                                       
      |       |                                         /----------------- Cagra.0618s0003.1.p/58-81     (12)
      |       |                                         |                             
      |       |                                 /---57--+        /-------- Cagra.0807s0009.1.p/320-343   (26)
      |       |                                 |       \---68---+                    
      |       |                                 |                \-------- Cagra.0248s0008.1.p/394-418   (36)
      |       |                                 |                                     
      |       |                                 |                /-------- Cagra.1671s0119.1.p/309-333   (23)
      |       |                         /---69--+-------100------+                    
      |       |                         |       |                \-------- Cagra.0301s0088.1.p/309-335   (63)
      |       |                         |       |                                     
      |       |                         |       |                /-------- Cagra.0922s0006.1.p/354-379   (33)
      |       |                /---68---+       \-------99-------+                    
      |       |                |        |                        \-------- Cagra.0712s0020.1.p/352-374   (85)
      |       |                |        |                                             
      \---78--+                |        |                        /-------- Cagra.0434s0021.1.p/332-358   (35)
              |-------94-------+        \-----------86-----------+                    
              |                |                                 \-------- Cagra.1194s0020.1.p/321-347   (54)
              |                |                                                      
              |                \------------------------------------------ Cagra.0551s0039.1.p/339-364   (75)
              |                                                                       
              |                                                  /-------- Cagra.0248s0008.1.p/112-134   (18)
              |------------------------83------------------------+                    
              |                                                  \-------- Cagra.0807s0009.1.p/48-71     (64)
              |                                                                       
              |----------------------------------------------------------- Cagra.0712s0020.1.p/150-174   (27)
              |                                                                       
              |                                                  /-------- Cagra.1194s0020.1.p/88-112    (28)
              |------------------------86------------------------+                    
              |                                                  \-------- Cagra.0434s0021.1.p/93-117    (79)
              |                                                                       
              |                                                  /-------- Cagra.0922s0006.1.p/104-128   (31)
              |------------------------100-----------------------+                    
              |                                                  \-------- Cagra.0712s0020.1.p/100-125   (94)
              |                                                                       
              |                                                  /-------- Cagra.0712s0020.1.p/304-329   (37)
              |------------------------84------------------------+                    
              |                                                  \-------- Cagra.0922s0006.1.p/308-332   (45)
              |                                                                       
              |----------------------------------------------------------- Cagra.0551s0039.1.p/95-119    (41)
              |                                                                       
              |                                                  /-------- Cagra.0248s0008.1.p/348-373   (44)
              |------------------------100-----------------------+                    
              |                                                  \-------- Cagra.0807s0009.1.p/273-298   (65)
              |                                                                       
              |                                                  /-------- Cagra.5641s0032.1.p/346-371   (50)
              |------------------------55------------------------+                    
              |                                                  \-------- Cagra.5641s0032.1.p/481-504   (55)
              |                                                                       
              |----------------------------------------------------------- Cagra.0551s0039.1.p/292-318   (51)
              |                                                                       
              |                                                  /-------- Cagra.1671s0119.1.p/140-163   (56)
              |------------------------99------------------------+                    
              |                                                  \-------- Cagra.0301s0088.1.p/136-159   (87)
              |                                                                       
              |                                                  /-------- Cagra.0922s0006.1.p/58-82     (58)
              |                                         /---80---+                    
              |                                         |        \-------- Cagra.0712s0020.1.p/54-79     (86)
              |--------------------62-------------------+                             
              |                                         \----------------- Cagra.0551s0039.1.p/50-74     (95)
              |                                                                       
              |----------------------------------------------------------- Cagra.5641s0032.1.p/227-253   (61)
              |                                                                       
              |                                                  /-------- Cagra.2991s0039.1.p/35-55     (66)
              |                                         /---100--+                    
              |                                         |        \-------- Cagra.0664s0084.1.p/34-54     (93)
              |--------------------55-------------------+                             
              |                                         \----------------- Cagra.5647s0054.1.p/99-124    (89)
              |                                                                       
              |----------------------------------------------------------- Cagra.5641s0032.1.p/178-201   (68)
              |                                                                       
              |----------------------------------------------------------- Cagra.5641s0032.1.p/426-450   (69)
              |                                                                       
              |----------------------------------------------------------- Cagra.0551s0039.1.p/141-165   (76)
              |                                                                       
              \----------------------------------------------------------- Cagra.5641s0032.1.p/272-296   (84)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      /------------------------------------------------------------------- Cagra.3957s0020.1.p  (1)
      |                                                                               
      |------------------------------------------------------------------- Cagra.0993s0051.1.p  (38)
      |                                                                               
      |              /---------------------------------------------------- Cagra.1968s0078.1.p  (2)
      |              |                                                                
      |              |                                            /------- Cagra.13389s0004.1.p (3)
      |              |                             /------100-----+                   
      |              |                             |              \------- Cagra.1535s0020.1.p  (24)
      |              |                             |                                  
      |              |                     /--100--+              /------- Cagra.0925s0010.1.p  (5)
      |              |                     |       |      /--100--+                   
      |              |                     |       |      |       \------- Cagra.2495s0002.1.p  (30)
      |              |              /--99--+       \--99--+                           
      |              |              |      |              \--------------- Cagra.0891s0057.1.p  (33)
      |              |              |      |                                          
      |              |              |      \------------------------------ Cagra.2925s0033.1.p  (8)
      |              |      /---96--+                                                 
      |              |      |       |                     /--------------- Cagra.8929s0001.1.p  (7)
      |              |      |       |                     |                           
      |              |      |       \----------90---------+       /------- Cagra.9070s0001.1.p  (40)
      |              |--100-+                             \--100--+                   
      |              |      |                                     \------- Cagra.0495s0060.1.p  (47)
      |              |      |                                                         
      |              |      |                                     /------- Cagra.0381s0001.1.p  (23)
      |              |      \------------------98-----------------+                   
      |              |                                            \------- Cagra.0897s0006.1.p  (36)
      |              |                                                                
      |              |                                            /------- Cagra.0301s0088.1.p  (4)
      |              |---------------------100--------------------+                   
      |              |                                            \------- Cagra.1671s0119.1.p  (21)
      |              |                                                                
      |              |---------------------------------------------------- Cagra.10427s0037.1.p (6)
      |              |                                                                
      |              |                                            /------- Cagra.0434s0021.1.p  (9)
      |              |                                    /---95--+                   
      |              |                                    |       \------- Cagra.1194s0020.1.p  (16)
      +              |                                    |                           
      |              |                             /--53--+--------------- Cagra.5647s0054.1.p  (19)
      |              |                             |      |                           
      |              |                             |      \--------------- Cagra.5641s0032.1.p  (35)
      |              |                             |                                  
      |              |--------------57-------------+              /------- Cagra.0922s0006.1.p  (18)
      |              |                             |      /--100--+                   
      |              |                             |      |       \------- Cagra.0712s0020.1.p  (44)
      |              |                             \--100-+                           
      |              |                                    \--------------- Cagra.0551s0039.1.p  (42)
      |              |                                                                
      |              |---------------------------------------------------- Cagra.1681s0032.1.p  (11)
      |      /---53--+                                                                
      |      |       |                                            /------- Cagra.0664s0084.1.p  (12)
      |      |       |---------------------100--------------------+                   
      |      |       |                                            \------- Cagra.2991s0039.1.p  (13)
      |      |       |                                                                
      |      |       |                             /---------------------- Cagra.1961s0021.1.p  (14)
      |      |       |                             |                                  
      |      |       |                             |              /------- Cagra.8005s0013.1.p  (17)
      |      |       |                     /---54--+      /--100--+                   
      |      |       |                     |       |      |       \------- Cagra.0430s0043.1.p  (31)
      |      |       |                     |       \--100-+                           
      |      |       |                     |              \--------------- Cagra.1195s0020.1.p  (43)
      |      |       |----------85---------+                                          
      |      |       |                     |              /--------------- Cagra.0926s0077.1.p  (22)
      |      |       |                     |              |                           
      |      |       |                     \------99------+       /------- Cagra.0799s0006.1.p  (27)
      |      |       |                                    \---99--+                   
      |      |       |                                            \------- Cagra.0808s0019.1.p  (49)
      |      |       |                                                                
      |      |       |---------------------------------------------------- Cagra.2622s0030.1.p  (15)
      |      |       |                                                                
      |      |       |                                            /------- Cagra.0094s0010.1.p  (20)
      |      |       |                                    /--100--+                   
      |      |       |                                    |       \------- Cagra.2248s0023.1.p  (32)
      \--99--+       |-----------------100----------------+                           
             |       |                                    \--------------- Cagra.1914s0035.1.p  (48)
             |       |                                                                
             |       |                                            /------- Cagra.1569s0001.1.p  (25)
             |       |---------------------77---------------------+                   
             |       |                                            \------- Cagra.0338s0020.1.p  (34)
             |       |                                                                
             |       |                                    /--------------- Cagra.0618s0003.1.p  (26)
             |       |                                    |                           
             |       |-----------------87-----------------+       /------- Cagra.0807s0009.1.p  (37)
             |       |                                    \---99--+                   
             |       |                                            \------- Cagra.0248s0008.1.p  (45)
             |       |                                                                
             |       |---------------------------------------------------- Cagra.9128s0003.1.p  (28)
             |       |                                                                
             |       |---------------------------------------------------- Cagra.3568s0002.1.p  (29)
             |       |                                                                
             |       |---------------------------------------------------- Cagra.1004s0006.1.p  (39)
             |       |                                                                
             |       |                                            /------- Cagra.1111s0013.1.p  (41)
             |       \---------------------100--------------------+                   
             |                                                    \------- Cagra.8004s0002.1.p  (46)
             |                                                                        
             \------------------------------------------------------------ Cagra.1211s0017.1.p  (10)