PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3433
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Subtree rooted at node 89: /----- Gh_D12G2330 [Gossypium hirsutum] (2) /-100+ | \----- Gh_A12G2154 [Gossypium hirsutum] (43) /-100+ | \---------- Gorai.008G256800.1 [Gossypium raimondii] (52) /-100-+ | \--------------- Cotton_A_13227_BGI-A2_v1.0 [Gossypium arboreum] (56) | /-98-+ /----- Gh_D03G1798 [Gossypium hirsutum] (32) | | | | \------100------+----- Gorai.003G076400.1 [Gossypium raimondii] (34) | | | \----- Gh_A02G0957 [Gossypium hirsutum] (39) /-93-+ | | /--------------- Thecc1EG015683t1 [Theobroma cacao] (3) | | | | | | /----- Gh_D09G1792 [Gossypium hirsutum] (16) | \----64----+ /-100+ | | | \----- Gorai.006G206100.1 [Gossypium raimondii] (24) | \-100+ /-99-+ | /----- Gh_A09G2358 [Gossypium hirsutum] (45) | | \-100+ | | \----- Cotton_A_08143_BGI-A2_v1.0 [Gossypium arboreum] (53) | | | | /---------- evm.model.supercontig_15.30 [Carica papaya] (4) | | | /-99-+ \---------87---------+ /----- Neem_40068_f_1 [Azadirachta indica] (23) | | \-100+ | | \----- Neem_10124_f_2 [Azadirachta indica] (57) | | | | /----- Ciclev10021521m [Citrus clementina] (10) | \--------------100-------------+ | \----- orange1.1g023047m [Citrus sinensis] (55) /-76-+ | | /----- Gorai.004G122800.1 [Gossypium raimondii] (20) | | /-100+ | | | \----- Gh_D08G1106 [Gossypium hirsutum] (38) | | /-100+ | | | | /----- Gh_A08G0897 [Gossypium hirsutum] (36) /--99-+ | | \-100+ | | \-----------100-----------+ \----- Cotton_A_19623_BGI-A2_v1.0 [Gossypium arboreum] (41) | | | | | \--------------- Thecc1EG015456t1 [Theobroma cacao] (33) | | /-89-+ | /----- EcC046901.10 [Eucalyptus camaldulensis] (9) | | \-------------------100------------------+ | | \----- Eucgr.D01698.1.p [Eucalyptus grandis] (30) | | /-99-+ | /----- Eucgr.A01441.1.p [Eucalyptus grandis] (8) | | \----------------------100---------------------+ | | \----- Eucgr.K00405.1.p [Eucalyptus grandis] (47) | | --99-+ \--------------------------------------------------------- GSBRNA2T00007906001 [Brassica napus] (37) | | /----- XP_010529660.1 [Tarenaya hassleriana] (5) \---------------------------100--------------------------+ \----- XP_010541804.1 [Tarenaya hassleriana] (29) Root part of tree: /------------------------------------------------------------------- XP_009109305.1 [Brassica rapa] (1) | | /----------- XP_013625331.1 [Brassica oleracea] (11) | | |--------------------------100--------------------------+ /------ GSBRNA2T00058462001 [Brassica napus] (19) | \-100+ | \------ GSBRNA2T00027253001 [Brassica napus] (48) | | /------ (89) | /-99-+ | | \------ AA54G00238 [Aethionema arabicum] (60) | /----------98---------+ | | \----------- KFK28963.1 [Arabis alpina] (44) | | | | /------ 858243 [Arabidopsis lyrata] (6) | | /-100+ | | | \------ Araha.6019s0002.1.p [Arabidopsis halleri] (26) | /--99-+ /-------100------+ | | | | \----------- AT4G24060.1 [Arabidopsis thaliana] (35) | | | | | | | | /------ Csa10g018980.1 [Camelina sativa] (17) | | | | /-100+ | | \-98-+ | \------ Csa12g030340.1 [Camelina sativa] (18) | | | /--99-+ | | | | \----------- Csa11g020730.1 [Camelina sativa] (61) | /--97-+ | /-82-+ | | | | | \----------------- Bostr.7867s0213.1.p [Boechera stricta] (59) | | | \-100-+ + | | | /------ Carubv10005156m [Capsella rubella] (27) | | | \------100------+ | /-100+ | \------ Cagra.1226s0072.1.p [Capsella grandiflora] (50) | | | | | | | \--------------------------------------- Thhalv10025581m [Eutrema salsugineum] (13) | | | | | \--------------------------------------------- Tp7g22030 [Thellungiella parvula] (14) | | | | /------ GSBRNA2T00018083001 [Brassica napus] (7) | /--66-+ /-100+ | | | | \------ XP_009137416.1 [Brassica rapa] (42) | | | | | | | | /------ XP_013595236.1 [Brassica oleracea] (12) | | | /-100-+-100+ | | | | | \------ GSBRNA2T00020030001 [Brassica napus] (46) | | | | | | | \---------------100--------------+ \----------- GSBRNA2T00154414001 [Brassica napus] (22) | | | | | | /------ Rsa1.0_00340.1_g00001.1 [Raphanus sativus] (15) | /-100+ \----100---+ | | | \------ RrC10219_p1 [Raphanus raphanistrum] (54) | | | | | | /------ XP_013617469.1 [Brassica oleracea] (25) | | | /-90-+ | | | | \------ GSBRNA2T00116168001 [Brassica napus] (31) | | | | | | | /-100-+----------- GSBRNA2T00034298001 [Brassica napus] (28) \-100-+ | | | | | | \----------- XP_009137657.1 [Brassica rapa] (58) | \------------------100-----------------+ | | /------ RrC15577_p1 [Raphanus raphanistrum] (40) | \----100---+ | \------ Rsa1.0_00547.1_g00008.1 [Raphanus sativus] (49) | | /------ RrC24601_p1 [Raphanus raphanistrum] (21) \--------------------------100-------------------------+ \------ Rsa1.0_00007.1_g00039.1 [Raphanus sativus] (51) |