PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.A01441.1.p | ||||||||
Common Name | EUGRSUZ_A01441, LOC104437605 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Dof | ||||||||
Protein Properties | Length: 257aa MW: 27728.1 Da PI: 9.7761 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.7 | 3e-39 | 30 | 90 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 k++al+cprC st+tkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ s Eucgr.A01441.1.p 30 KDQALNCPRCTSTHTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPS 90 7899******************************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-25 | 26 | 82 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.4E-33 | 31 | 88 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.798 | 34 | 88 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 36 | 72 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MDTAEWRQGI GVIKAMEGSS RPALRSRPQK DQALNCPRCT STHTKFCYYN NYSLSQPRYF 60 CKTCRRYWTE GGSLRNVPVG GGSRKNKRPS SSSPSTSSSS SKNKIIPNLT PPPPTILHSD 120 PQNPNNKPQE GQGFGLPSYL PAQAYAALSH HLPNPSSSSS PMEFLKSGGS WPSGLSLSSL 180 MAIPGSDSSA CMYSASAGFP LQELKPNLQY FSLAGLEAGE FKQVPSRTAE LEQMNRGQHG 240 DPSTGYWSKL MGGGSW* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.A01441.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010048893.1 | 0.0 | PREDICTED: dof zinc finger protein DOF1.8 | ||||
TrEMBL | A0A059DEE3 | 0.0 | A0A059DEE3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010048893.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3433 | 27 | 61 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 4e-34 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.A01441.1.p |
Entrez Gene | 104437605 |