PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2576
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 128: /----- XP_009104076.1 [Brassica rapa] (3) /-100+ | \----- GSBRNA2T00098895001 [Brassica napus] (57) /-100+ | | /----- XP_013588353.1 [Brassica oleracea] (39) | \-100+ /-100-+ \----- GSBRNA2T00105760001 [Brassica napus] (41) | | | | /----- Rsa1.0_08919.1_g00002.1 [Raphanus sativus] (47) | \---100---+ | \----- RrC5379_p3 [Raphanus raphanistrum] (65) | /-77-+ /----- GSBRNA2T00087898001 [Brassica napus] (8) | | /-100+ | | | \----- XP_013633542.1 [Brassica oleracea] (36) | | /-89-+ | | | | /----- XP_009139008.1 [Brassica rapa] (15) | | | \-100+ | \-100-+ \----- GSBRNA2T00149075001 [Brassica napus] (49) | | | | /----- RrC3017_p5 [Raphanus raphanistrum] (60) | \---100---+ | \----- Rsa1.0_01157.1_g00008.1 [Raphanus sativus] (62) /-72-+ | | /----- GSBRNA2T00121938001 [Brassica napus] (10) | | /-100+ | | | \----- XP_009116480.1 [Brassica rapa] (37) | | /-91-+ | | | | /----- GSBRNA2T00155766001 [Brassica napus] (29) | | | \-100+ | | /-100-+ \----- XP_013605919.1 [Brassica oleracea] (45) /-73-+ | | | | | | | | /----- Rsa1.0_05324.1_g00001.1 [Raphanus sativus] (32) | | \-97-+ \---100---+ | | | \----- RrC456_p7 [Raphanus raphanistrum] (70) | | | /-84-+ | \--------------------- 676754832 [Sisymbrium irio] (42) | | | | | \------------------------------- Tp5g04890 [Thellungiella parvula] (33) | | | \------------------------------------ Thhalv10006040m [Eutrema salsugineum] (38) | | /----- Araha.10017s0012.1.p [Arabidopsis halleri] (4) | /-97-+ | | \----- 486233 [Arabidopsis lyrata] (59) | /------100------+ /-100+ | \---------- AT3G57800.1 [Arabidopsis thaliana] (35) | | | | | | /----- Cagra.0210s0018.1.p [Capsella grandiflora] (9) | | | /---100---+ | | /-98-+ | \----- Carubv10018503m [Capsella rubella] (50) | | | | | | | | | /--91-+ /----- Csa06g033630.1 [Camelina sativa] (30) | | | | | | /-100+ /-100-+ | | | | | | \----- Csa04g044320.1 [Camelina sativa] (55) | | \----89---+ \-97-+ \-100+ | | | | \---------- Csa09g070400.1 [Camelina sativa] (71) | | | | | | | \--------------------- Bostr.20903s0035.1.p [Boechera stricta] (52) | | | | | \------------------------------- KFK35018.1 [Arabis alpina] (13) | | | \---------------------------------------------- AA61G00221 [Aethionema arabicum] (63) | | /------------------------------- KFK37059.1 [Arabis alpina] (5) | | | | /----- Csa05g009300.1 [Camelina sativa] (16) | | /-84-+ | | | \----- Csa06g048330.1 [Camelina sativa] (27) | | /-100+ | | | \---------- Csa04g057780.1 [Camelina sativa] (68) | /-97-+ /--97-+ | | | | | /----- Carubv10023618m [Capsella rubella] (22) /-100+ | | | \---100---+ | | | | /-100+ \----- Cagra.2636s0014.1.p [Capsella grandiflora] (43) | | | | | | | | | | | \--------------------- Bostr.25993s0549.1.p [Boechera stricta] (25) | | | \-100+ | | | | /---------- AT2G42300.1 [Arabidopsis thaliana] (20) | | | | | | | | \------100------+ /----- Araha.0018s0031.1.p [Arabidopsis halleri] (26) | | | \-93-+ | | | \----- 483321 [Arabidopsis lyrata] (34) | | /-100+ | | | | /----- GSBRNA2T00010830001 [Brassica napus] (7) | | | | /-100+ | | | | | \----- XP_013636341.1 [Brassica oleracea] (51) /-100+ | | | /-100+ | | | | | | | /----- XP_009142817.1 [Brassica rapa] (21) | | | | | | \-100+ | | | | | /-100-+ \----- GSBRNA2T00132735001 [Brassica napus] (58) | | \----100---+ | | | | | | | /-84-+ \--------------- RrC156_p14 [Raphanus raphanistrum] (44) | | | | | | | | | \---100---+ \--------------------- 676742304 [Sisymbrium irio] (67) | | | | | | | \-------------------------- Tp4g24470 [Thellungiella parvula] (61) | | | --97-+ | \----------------------------------------- AA21G00006 [Aethionema arabicum] (19) | | | | /----- XP_010524267.1 [Tarenaya hassleriana] (48) | \-------------------------97------------------------+ | \----- XP_010547446.1 [Tarenaya hassleriana] (54) | | /----- orange1.1g015330m [Citrus sinensis] (18) | /-100+ | | \----- Ciclev10005087m [Citrus clementina] (69) | /-100+ | | \---------- Neem_3863_f_1 [Azadirachta indica] (40) \----------------------63----------------------+ \--------------- XP_010534340.1 [Tarenaya hassleriana] (28) Root part of tree: /------------------------------------------------------------------- Cotton_A_15346_BGI-A2_v1.0 [Gossypium arboreum] (1) | |------------------------------------------------------------------- Gh_A01G1663 [Gossypium hirsutum] (6) | | /---------- Gh_D09G1180 [Gossypium hirsutum] (2) | /---97---+ | | \---------- Gorai.006G139900.1 [Gossypium raimondii] (23) | /---100---+ | | | /---------- Cotton_A_07791_BGI-A2_v1.0 [Gossypium arboreum] (11) | | \---99---+ | | \---------- Gh_A09G1174 [Gossypium hirsutum] (46) | /---100--+ | | | /---------- (128) + | | /---100--+ | | | | \---------- evm.model.supercontig_85.120 [Carica papaya] (17) | /----53---+ \---100---+ | | | \------------------- Eucgr.A02413.1.p [Eucalyptus grandis] (12) | | | | | \-------------------------------------- Thecc1EG024828t1 [Theobroma cacao] (31) | | | /---100--+ /------------------- Gh_A11G2808 [Gossypium hirsutum] (14) | | | | | | | /----86---+ /---------- Gh_D11G3162 [Gossypium hirsutum] (53) | | | | \---100--+ | | \--------100-------+ \---------- Gorai.007G361700.1 [Gossypium raimondii] (66) \---100---+ | | \----------------------------- Cotton_A_06612_BGI-A2_v1.0 [Gossypium arboreum] (24) | | /---------- Gorai.002G229100.1 [Gossypium raimondii] (56) \----------------------100---------------------+ \---------- Gh_D01G1913 [Gossypium hirsutum] (64) |