PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for OGEM2012
Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 140:

                                                                    /----- Csa12g022020.1 [Camelina sativa]                        (3)
                                                               /-100+                 
                                                               |    \----- Csa11g015260.1 [Camelina sativa]                        (79)
                                                          /-100+                      
                                                          |    \---------- Csa10g014120.1 [Camelina sativa]                        (57)
                                                    /--89-+                           
                                                    |     |         /----- Carubv10005324m [Capsella rubella]                      (24)
                                                    |     \---100---+                 
                                               /-99-+               \----- Cagra.1225s0041.1.p [Capsella grandiflora]              (28)
                                               |    |                                 
                                               |    \--------------------- Bostr.7867s0691.1.p [Boechera stricta]                  (66)
                                               |                                      
                                          /-80-+                    /----- 857774 [Arabidopsis lyrata]                             (8)
                                          |    |               /-100+                 
                                          |    |               |    \----- Araha.3365s0004.1.p [Arabidopsis halleri]               (17)
                                          |    \-------98------+                      
                                          |                    \---------- AT4G28500.1 [Arabidopsis thaliana]                      (25)
                                          |                                           
                                          |                         /----- GSBRNA2T00065806001 [Brassica napus]                    (10)
                                          |                    /-100+                 
                                          |                    |    \----- XP_013609952.1 [Brassica oleracea]                      (60)
                                          |               /-91-+                      
                                          |               |    |    /----- XP_009129565.1 [Brassica rapa]                          (71)
                                          |               |    \-100+                 
                                          |         /--72-+         \----- GSBRNA2T00058097001 [Brassica napus]                    (72)
                                          |         |     |                           
                                          |         |     |         /----- RrC1054_p2 [Raphanus raphanistrum]                      (59)
                                          |         |     \---100---+                 
                                          |         |               \----- Rsa1.0_00476.1_g00004.1 [Raphanus sativus]              (65)
                                          |         |                                 
                                     /-50-+         |               /----- XP_013596215.1 [Brassica oleracea]                      (15)
                                     |    |    /-50-+          /-100+                 
                                     |    |    |    |          |    \----- GSBRNA2T00154717001 [Brassica napus]                    (20)
                                     |    |    |    |     /-98-+                      
                                     |    |    |    |     |    \---------- Rsa1.0_00113.1_g00021.1 [Raphanus sativus]              (69)
                                     |    |    |    |     |                           
                                     |    |    |    |     |         /----- XP_009137790.1 [Brassica rapa]                          (35)
                                     |    |    |    \-100-+---100---+                 
                                     |    |    |          |         \----- GSBRNA2T00044371001 [Brassica napus]                    (48)
                                     |    |-50-+          |                           
                                     |    |    |          \--------------- RrC6425_p1 [Raphanus raphanistrum]                      (63)
                                /-100+    |    |                                      
                                |    |    |    |-------------------------- Tp7g26480 [Thellungiella parvula]                       (40)
                                |    |    |    |                                      
                                |    |    |    |-------------------------- Thhalv10025819m [Eutrema salsugineum]                   (50)
                                |    |    |    |                                      
                                |    |    |    \-------------------------- 676753192 [Sisymbrium irio]                             (55)
                                |    |    |                                           
                                |    |    \------------------------------- KFK29384.1 [Arabis alpina]                              (76)
                                |    |                                                
                                |    |------------------------------------ XP_010526500.1 [Tarenaya hassleriana]                   (41)
                                |    |                                                
                                |    \------------------------------------ AA102G00007 [Aethionema arabicum]                       (68)
                                |                                                     
                                |                                   /----- Neem_14534_f_2 [Azadirachta indica]                     (4)
                                |                              /-100+                 
                           /-100+                              |    \----- Neem_12089_f_2 [Azadirachta indica]                     (74)
                           |    |                   /----94----+                      
                           |    |                   |          \---------- Eucgr.K01061.1.p [Eucalyptus grandis]                   (36)
                           |    |                   |                                 
                           |    |                   |               /----- Gh_D12G1407 [Gossypium hirsutum]                        (9)
                           |    |                   |          /-97-+                 
                           |    |              /-95-+          |    \----- Gorai.008G155200.1 [Gossypium raimondii]                (73)
                           |    |              |    |     /-100+                      
                           |    |              |    |     |    |    /----- Gh_A12G1285 [Gossypium hirsutum]                        (32)
                           |    |              |    |     |    \-84-+                 
                           |    |              |    \-100-+         \----- Cotton_A_04481_BGI-A2_v1.0 [Gossypium arboreum]         (42)
                           |    |         /-95-+          |                           
                     /--80-+    |         |    |          \--------------- Thecc1EG008229t1 [Theobroma cacao]                      (30)
                     |     |    |         |    |                                      
                     |     |    |         |    |                    /----- orange1.1g021635m [Citrus sinensis]                     (7)
                     |     |    \---100---+    \---------100--------+                 
                     |     |              |                         \----- Ciclev10017822m [Citrus clementina]                     (51)
                     |     |              |                                           
                     |     |              \------------------------------- evm.model.supercontig_83.99 [Carica papaya]             (81)
                     |     |                                                          
                     |     |                                        /----- Gorai.010G157600.1 [Gossypium raimondii]                (21)
                     |     |                                   /-100+                 
                     |     |                                   |    \----- Gh_D06G1417 [Gossypium hirsutum]                        (44)
                     |     \----------------100----------------+                      
                     |                                         |    /----- Cotton_A_37659_BGI-A2_v1.0 [Gossypium arboreum]         (27)
                     |                                         \-99-+                 
                     |                                              \----- Gh_A06G2028 [Gossypium hirsutum]                        (52)
                     |                                                                
                     |                                              /----- Cotton_A_11313_BGI-A2_v1.0 [Gossypium arboreum]         (6)
                     |                                         /-67-+                 
                     |                                         |    \----- Gh_A05G1339 [Gossypium hirsutum]                        (12)
                     |                                    /-100+                      
                     |                                    |    |    /----- Gh_D05G1508 [Gossypium hirsutum]                        (11)
                     |                                    |    \-100+                 
                /-100+-----------------100----------------+         \----- Gorai.009G166300.1 [Gossypium raimondii]                (22)
                |    |                                    |                           
                |    |                                    \--------------- Thecc1EG029798t1 [Theobroma cacao]                      (54)
                |    |                                                                
                |    |                                              /----- Eucgr.D00591.1.p [Eucalyptus grandis]                   (13)
                |    |                                         /-89-+                 
                |    |                                         |    \----- Eucgr.D00592.1.p [Eucalyptus grandis]                   (80)
                |    |                                         |                      
                |    |                                    /-100+    /----- Eucgr.D00594.1.p [Eucalyptus grandis]                   (26)
                |    |                                    |    |    |                 
                |    |                                    |    \-91-+----- Eucgr.D00595.1.p [Eucalyptus grandis]                   (29)
                |    |                                    |         |                 
           /-89-+    |                              /--87-+         \----- EcS577108.10 [Eucalyptus camaldulensis]                 (77)
           |    |    |                              |     |                           
           |    |    |                              |     |         /----- Eucgr.E03226.1.p [Eucalyptus grandis]                   (14)
           |    |    |--------------57--------------+     \---100---+                 
           |    |    |                              |               \----- EcC025730.20 [Eucalyptus camaldulensis]                 (23)
           |    |    |                              |                                 
           |    |    |                              \--------------------- evm.model.supercontig_2586.1 [Carica papaya]            (37)
           |    |    |                                                                
           |    |    |                                              /----- Ciclev10015976m [Citrus clementina]                     (43)
      --51-+    |    \----------------------100---------------------+                 
           |    |                                                   \----- Neem_17750_f_1 [Azadirachta indica]                     (47)
           |    |                                                                     
           |    \--------------------------------------------------------- XP_010549363.1 [Tarenaya hassleriana]                   (38)
           |                                                                          
           |                                                        /----- Carubv10009638m [Capsella rubella]                      (34)
           |                                                   /-100+                 
           |                                                   |    \----- Cagra.1822s0012.1.p [Capsella grandiflora]              (64)
           \-------------------------92------------------------+                      
                                                               |    /----- Csa17g039350.1 [Camelina sativa]                        (46)
                                                               \-100+                 
                                                                    \----- Csa03g031810.1 [Camelina sativa]                        (70)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Tp1g24720 [Thellungiella parvula]                       (1)
      |                                                                               
      |                                                          /-------- XP_009102906.1 [Brassica rapa]                          (5)
      |                                                 /---63---+                    
      |                                                 |        \-------- GSBRNA2T00089877001 [Brassica napus]                    (49)
      |-----------------------100-----------------------+                             
      |                                                 |        /-------- GSBRNA2T00157940001 [Brassica napus]                    (53)
      |                                                 \---100--+                    
      |                                                          \-------- XP_013596124.1 [Brassica oleracea]                      (67)
      |                                                                               
      |                                                          /-------- Rsa1.0_00601.1_g00016.1 [Raphanus sativus]              (2)
      |                                         /-------100------+                    
      |                                         |                \-------- RrC18663_p1 [Raphanus raphanistrum]                     (58)
      +                                         |                                     
      |                                         |------------------------- 676750274 [Sisymbrium irio]                             (31)
      |       /----------------98---------------+                                     
      |       |                                 |       /----------------- XP_009113660.1 [Brassica rapa]                          (33)
      |       |                                 |       |                             
      |       |                                 |       |----------------- GSBRNA2T00003406001 [Brassica napus]                    (39)
      |       |                                 \--100--+                             
      |       |                                         |        /-------- GSBRNA2T00046259001 [Brassica napus]                    (45)
      |       |                                         \---100--+                    
      |       |                                                  \-------- XP_013638897.1 [Brassica oleracea]                      (78)
      |       |                                                                       
      |       |                                                  /-------- (140)
      |       |                                 /-------55-------+                    
      \---98--+                                 |                \-------- Bostr.15697s0168.1.p [Boechera stricta]                 (56)
              |                                 |                                     
              |                         /---61--+                /-------- 890389 [Arabidopsis lyrata]                             (16)
              |                         |       |       /---99---+                    
              |                         |       |       |        \-------- Araha.5599s0009.1.p [Arabidopsis halleri]               (62)
              |                /---63---+       \---99--+                             
              |                |        |               \----------------- AT1G28470.1 [Arabidopsis thaliana]                      (75)
              |                |        |                                             
              |        /---57--+        \--------------------------------- AA361G00005 [Aethionema arabicum]                       (61)
              |        |       |                                                      
              \---76---+       \------------------------------------------ KFK44718.1 [Arabis alpina]                              (18)
                       |                                                              
                       \-------------------------------------------------- Thhalv10008249m [Eutrema salsugineum]                   (19)