PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA1072
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Subtree rooted at node 119: /----- XP_016500166.1 [Nicotiana tabacum] (2) /-100+ | \----- XP_009590627.1 [Nicotiana tomentosiformis] (83) /-57-+ | \---------- Niben101Scf02287g00010.1 [Nicotiana benthamiana] (59) | /------100------+ /----- XP_009796881.1 [Nicotiana sylvestris] (35) | | /-100+ | | | \----- XP_016442441.1 [Nicotiana tabacum] (43) | \-100+ | \---------- Niben101Scf03894g04001.1 [Nicotiana benthamiana] (74) /-100+ | | /-------------------------- CA01g00280 [Capsicum annuum] (7) | | | | | | /--------------- PGSC0003DMP400021649 [Solanum tuberosum] (14) | | | | | \-100+ /-100-+ /---------- Sopen08g031370.1 [Solanum pennellii] (22) | | | | | | | | \-100+ /----- Sopim08g083170.0.1 [Solanum pimpinellifolium] (24) | \-100+ \-100+ | | \----- Solyc08g083170.1.1 [Solanum lycopersicum] (79) | | | \--------------------- Sme2.5_10149.1_g00003.1 [Solanum melongena] (42) /-100+ | | /-------------------------- CA01g34700 [Capsicum annuum] (4) | | | | | | /----- Sopim08g008600.0.1 [Solanum pimpinellifolium] (10) | | | /-100+ | | | | \----- Solyc08g008600.2.1 [Solanum lycopersicum] (17) | | /-100+ /-100+ | | | | | \---------- Sopen08g004440.1 [Solanum pennellii] (84) | | | | /-100-+ | | | | | \--------------- PGSC0003DMP400010389 [Solanum tuberosum] (67) | | | \-99-+ /-99-+ \-100+ \--------------------- Sme2.5_00130.1_g00003.1 [Solanum melongena] (72) | | | | | | /----- XP_016453820.1 [Nicotiana tabacum] (25) | | | /-100+ | | | | \----- XP_009617148.1 [Nicotiana tomentosiformis] (28) | | \---------100--------+ | | | /----- XP_009765330.1 [Nicotiana sylvestris] (27) | | \-100+ /--59-+ | \----- XP_016486002.1 [Nicotiana tabacum] (82) | | | | | | /----- Itr_sc002092.1_g00013.1 [Ipomoea trifida] (29) | | \----------------100----------------+ | | \----- Itr_sc000185.1_g00001.1 [Ipomoea trifida] (45) | | | | /----- XP_011081344.1 [Sesamum indicum] (26) | \-------------------97-------------------+ | \----- SMil_00005759-RA_Salv [Salvia miltiorrhiza] (48) | /-83-+ /----- DCAR_006551 [Daucus carota] (5) | | /-100+ | | | \----- DCAR_006552 [Daucus carota] (75) | |-------------------100-------------------+ | | | /----- DCAR_006548 [Daucus carota] (31) | | \-100+ /-100+ | \----- DCAR_006550 [Daucus carota] (37) | | | | | | /----- Achn281761 [Actinidia chinensis] (61) | | \----------------------95----------------------+ | | \----- Achn177941 [Actinidia chinensis] (85) | | --92-+ \--------------------------------------------------------- Cc08_g16790 [Coffea canephora] (34) | | /----- Achn346301 [Actinidia chinensis] (38) | /-100+ | | \----- Achn313661 [Actinidia chinensis] (44) \-------------------------99------------------------+ | /----- Achn104681 [Actinidia chinensis] (73) \-100+ \----- Achn310341 [Actinidia chinensis] (77) Subtree rooted at node 163: /--------------------- (119) | | /--------------- cra_locus_3040_iso_1 [Catharanthus roseus] (15) /-82-+ | | | | /----- DCAR_006988 [Daucus carota] (52) | \--75-+ /-100+ | | | \----- DCAR_006987 [Daucus carota] (60) | \-59-+ /-100+ \---------- Cc02_g39830 [Coffea canephora] (64) | | | | /----- SMil_00015009-RA_Salv [Salvia miltiorrhiza] (41) | | /-93-+ | | | \----- XP_011094312.1 [Sesamum indicum] (47) /----81---+ \-------86------+ | | | /----- Migut.B01912.1.p [Mimulus guttatus] (53) | | \-72-+ | | \----- KZV50882.1 [Dorcoceras hygrometricum] (65) | | | \------------------------------- Itr_sc010930.1_g00001.1 [Ipomoea trifida] (9) | | /----- Niben101Scf01102g05008.1 [Nicotiana benthamiana] (3) | /---100---+ | | \----- Niben101Scf01102g05005.1 [Nicotiana benthamiana] (76) | | | /--78-+ /---------- Niben101Scf01954g02004.1 [Nicotiana benthamiana] (13) | | | | /-100+ | \-69-+ /----- XP_016435398.1 [Nicotiana tabacum] (18) | | /---100---+ \-100+ | | | | \----- XP_009623534.1 [Nicotiana tomentosiformis] (57) | | | | | | | \--------------------- XP_009766909.1 [Nicotiana sylvestris] (58) | | | | | /-100+ /-------------------------- CA08g08700 [Capsicum annuum] (33) | | | | | | | | | | /----- Solyc01g096370.2.1 [Solanum lycopersicum] (36) | | | | | /-100+ | | | | | | \----- Sopim01g096370.0.1 [Solanum pimpinellifolium] (69) | | | \-100+ /-100+ | | | | | \---------- Sopen00g013520.1 [Solanum pennellii] (70) | \-100+ | /-100-+ | | | | \--------------- PGSC0003DMP400031944 [Solanum tuberosum] (62) | | \-100+ | | \--------------------- Sme2.5_02073.1_g00002.1 [Solanum melongena] (56) | | | | /----- Peinf101Scf00506g19004.1 [Petunia inflata] (6) | \--------------100-------------+ /-100-+ \----- Peaxi162Scf00767g00043.1 [Petunia axillaris] (11) | | | | /---------- Sopen10g005070.1 [Solanum pennellii] (20) | | | | | /-100+ /----- Sopim10g009290.0.1 [Solanum pimpinellifolium] (50) | | | \-100+ | | /-100-+ \----- Solyc10g009290.1.1 [Solanum lycopersicum] (63) | | | | | | /-100+ \--------------- Sme2.5_03511.1_g00006.1 [Solanum melongena] (78) | | | | | | | \--------------------- CA10g06410 [Capsicum annuum] (51) | | | | | /-100+ /----- XP_009604694.1 [Nicotiana tomentosiformis] (23) | | | | /---100---+ | | | | | \----- XP_016508165.1 [Nicotiana tabacum] (68) | | | | | | | | \----100---+ /----- Niben101Scf18066g00001.1 [Nicotiana benthamiana] (39) /-74-+ | | | /-96-+ | | | | | | \----- Niben101Scf09663g00002.1 [Nicotiana benthamiana] (66) | | \------100-----+ \-99-+ | | | | /----- XP_016449248.1 [Nicotiana tabacum] (40) | | | \-100+ | | | \----- XP_009776117.1 [Nicotiana sylvestris] (71) | | | | | | /----- Peinf101Scf00559g02002.1 [Petunia inflata] (80) | | \-----------100-----------+ | | \----- Peaxi162Scf00087g00093.1 [Petunia axillaris] (81) /-100+ | | | | /----- Solyc10g009270.2.1 [Solanum lycopersicum] (12) | | | /-100+ | | | | \----- Sopim10g009270.0.1 [Solanum pimpinellifolium] (30) | | | /-100+ | | | | \---------- Sopen10g005050.1 [Solanum pennellii] (21) | | \-----------------100----------------+ --100+ | \--------------- PGSC0003DMP400019126 [Solanum tuberosum] (19) | | | | /----- Peaxi162Scf00087g00075.1 [Petunia axillaris] (16) | \------------------------100------------------------+ | \----- Peinf101Scf00559g04018.1 [Petunia inflata] (49) | | /----- XP_016462596.1 [Nicotiana tabacum] (8) \---------------------------100--------------------------+ \----- XP_009592442.1 [Nicotiana tomentosiformis] (46) Root part of tree: /------------------------------------------------------------------- XP_009775258.1 [Nicotiana sylvestris] (1) | |------------------------------------------------------------------- XP_016470861.1 [Nicotiana tabacum] (32) | + /---------------------- (163) | /----------100---------+ | | \---------------------- Niben101Scf05073g02002.1 [Nicotiana benthamiana] (55) \---------100---------+ \--------------------------------------------- Niben101Scf05371g00004.1 [Nicotiana benthamiana] (54) |