PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1927
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 117: /---------- Gh_A05G2399 [Gossypium hirsutum] (2) | | /----- Gorai.009G295000.1 [Gossypium raimondii] (7) /-100+-100+ | | \----- Gh_D05G2664 [Gossypium hirsutum] (60) | | /--91-+ \---------- Cotton_A_04070_BGI-A2_v1.0 [Gossypium arboreum] (15) | | | | /----- Gorai.012G015900.1 [Gossypium raimondii] (28) | \---100---+ | \----- Gh_D04G0127 [Gossypium hirsutum] (66) | | /----- Gh_A13G0040 [Gossypium hirsutum] (23) /-99-+ /-100+ | | | \----- Cotton_A_15754_BGI-A2_v1.0 [Gossypium arboreum] (54) | | | | |----100---+---------- Gh_D13G0055 [Gossypium hirsutum] (52) | | | /-----------------57----------------+ | \---------- Gorai.013G005900.1 [Gossypium raimondii] (69) | | | | | \--------------------- Thecc1EG045438t1 [Theobroma cacao] (34) | | | | /----- orange1.1g027307m [Citrus sinensis] (13) | \---------100--------+ | \----- Ciclev10032684m [Citrus clementina] (17) | | /----- XP_013634930.1 [Brassica oleracea] (4) | /-99-+ | | \----- GSBRNA2T00113417001 [Brassica napus] (29) | | | /-97-+---------- GSBRNA2T00048529001 [Brassica napus] (45) | | | | | \---------- XP_009144310.1 [Brassica rapa] (71) | /--97-+ | | | /----- RrC22610_p1 [Raphanus raphanistrum] (16) | | \---100---+ | /-97-+ \----- Rsa1.0_17339.1_g00001.1 [Raphanus sativus] (26) | | | | | \--------------------- 676729134 [Sisymbrium irio] (79) | | | | /----- Rsa1.0_01254.1_g00010.1 [Raphanus sativus] (41) | /-61-+ /-100+ | | | | \----- RrC21462_p1 [Raphanus raphanistrum] (65) | | | /-100+ | | | | | /----- XP_009141058.1 [Brassica rapa] (59) | | | | \-97-+ | | \----80----+ \----- XP_013634737.1 [Brassica oleracea] (61) | | | | | \--------------- Tp4g12900 [Thellungiella parvula] (75) | | | | /----- Carubv10024870m [Capsella rubella] (6) | | /------100------+ | | | \----- Cagra.0567s0001.1.p [Capsella grandiflora] (31) | | | | | | /----- Csa07g012830.1 [Camelina sativa] (24) | /-84-+ | /-100+ | | | /-66-+ | \----- Csa05g033380.1 [Camelina sativa] (32) --66-+ | | | | /-99-+ | | | | | | \---------- Csa16g014550.1 [Camelina sativa] (63) | | | | | | | | |-80-+ \--53-+--------------- 481945 [Arabidopsis lyrata] (50) | | | | | | | | | \--------------- Bostr.24513s0205.1.p [Boechera stricta] (68) | /-100+ | | | | | | \-------------------------- AT2G30340.1 [Arabidopsis thaliana] (49) | | | | | | | |------------------------------- KFK24518.1 [Arabis alpina] (25) | | | | | /-82-+ | \------------------------------- Thhalv10017073m [Eutrema salsugineum] (58) | | | | | | | \------------------------------------ AA32G00667 [Aethionema arabicum] (8) | /--65-+ | | | | \----------------------------------------- XP_010558874.1 [Tarenaya hassleriana] (55) | | | | | \---------------------------------------------- evm.model.supercontig_2.327 [Carica papaya] (48) | /-55-+ | | | /--------------- Thecc1EG042262t1 [Theobroma cacao] (11) | | | | | | | | /----- Gh_A03G0198 [Gossypium hirsutum] (12) | | \-----------------100----------------+ /-92-+ | | | | \----- Cotton_A_04160_BGI-A2_v1.0 [Gossypium arboreum] (19) | | | | | | \-100+---------- Gorai.003G151800.1 [Gossypium raimondii] (36) |-99-+ | | | \---------- Gh_D03G1383 [Gossypium hirsutum] (80) | | | |--------------------------------------------------------- Eucgr.B04019.1.p [Eucalyptus grandis] (5) | | | | /---------- Neem_3828_f_1 [Azadirachta indica] (33) | | | | \----------------------65----------------------+ /----- Ciclev10002348m [Citrus clementina] (51) | \-100+ | \----- orange1.1g028221m [Citrus sinensis] (56) | |-------------------------------------------------------------- Neem_2759_f_1 [Azadirachta indica] (38) | \-------------------------------------------------------------- evm.model.supercontig_19.92 [Carica papaya] (57) Root part of tree: /------------------------------------------------------------------- Rsa1.0_17750.1_g00001.1 [Raphanus sativus] (1) | |------------------------------------------------------------------- RrC15100_p1 [Raphanus raphanistrum] (42) | | /-------- (117) | /---99---+ | | \-------- Eucgr.G03121.1.p [Eucalyptus grandis] (39) | /---99--+ | | \----------------- XP_010554704.1 [Tarenaya hassleriana] (67) | /-------99-------+ | | \------------------------- AA29G00228 [Aethionema arabicum] (77) | | | | /-------- XP_009133436.1 [Brassica rapa] (3) | | /---100--+ | | | \-------- GSBRNA2T00124701001 [Brassica napus] (44) | |-----------100----------+ | | | /-------- XP_013625779.1 [Brassica oleracea] (46) | | \---99---+ | | \-------- GSBRNA2T00028687001 [Brassica napus] (73) | | | | /-------- Csa05g012280.1 [Camelina sativa] (9) | | | | | /---100--+-------- Csa06g044870.1 [Camelina sativa] (35) | | | | | | | \-------- Csa04g054820.1 [Camelina sativa] (81) | | /---97--+ | | | | /-------- Cagra.1642s0010.1.p [Capsella grandiflora] (64) + | | \---99---+ | | /--100--+ \-------- Carubv10024002m [Capsella rubella] (74) | | | | | | | \------------------------- Bostr.23794s0013.1.p [Boechera stricta] (47) | |---86---+ | /---99--+ | /-------- Araha.25137s0002.1.p [Arabidopsis halleri] (10) | | | | | | | | \-----------64-----------+-------- AT2G40470.1 [Arabidopsis thaliana] (62) | | | | | | | \-------- 483104 [Arabidopsis lyrata] (70) | | | | | | /--------------------------------- Tp4g22810 [Thellungiella parvula] (18) | | | | | | | | /-------- XP_013636312.1 [Brassica oleracea] (20) | | |---73---+ /-------100------+ | | | | | \-------- GSBRNA2T00155110001 [Brassica napus] (76) | | | | | | /---100--+ | \--100--+ /-------- Rsa1.0_01200.1_g00011.1 [Raphanus sativus] (21) | | | | | /---100--+ | | | | | | \-------- RrC4020_p2 [Raphanus raphanistrum] (22) | | | | \--100--+ | | | | | /-------- GSBRNA2T00123296001 [Brassica napus] (40) | | | | \---100--+ | | | | \-------- XP_009141907.1 [Brassica rapa] (78) | | | | | | | |------------------------------------------ Thhalv10017905m [Eutrema salsugineum] (37) \--100--+ | | | | \------------------------------------------ KFK36928.1 [Arabis alpina] (53) | | | \-------------------------------------------------- 676735646 [Sisymbrium irio] (27) | | /-------- XP_013632344.1 [Brassica oleracea] (14) | /---98---+ | | \-------- GSBRNA2T00024342001 [Brassica napus] (43) | | \-------------------100-------------------+----------------- XP_009142693.1 [Brassica rapa] (30) | \----------------- GSBRNA2T00068329001 [Brassica napus] (72) |