PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1290
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 142: /-------------------------- KFK42538.1 [Arabis alpina] (8) | | /----- GSBRNA2T00150541001 [Brassica napus] (10) | /-100+ | | \----- XP_009119702.1 [Brassica rapa] (73) /-69-+ /-100+ | | | | /----- XP_013586129.1 [Brassica oleracea] (12) | | | \-100+ | | /-100-+ \----- GSBRNA2T00085351001 [Brassica napus] (63) | | | | /-95-+ \-100+ \--------------- Rsa1.0_00425.1_g00014.1 [Raphanus sativus] (64) | | | | | \--------------------- Tp1g00790 [Thellungiella parvula] (86) /-99-+ | | | \------------------------------- Thhalv10008374m [Eutrema salsugineum] (76) | | | \------------------------------------ 676747540 [Sisymbrium irio] (22) | /-100+ /----- Araha.7761s0002.1.p [Arabidopsis halleri] (9) | | /------100------+ | | | \----- AT1G01520.1 [Arabidopsis thaliana] (72) | | | | | | /---------- Csa17g001990.1 [Camelina sativa] (54) | \--------100--------+ | /-100-+ | /-100+ /----- Cagra.1968s0093.1.p [Capsella grandiflora] (85) | | | | \-100+ | | \--95-+ \----- Carubv10011679m [Capsella rubella] (92) | | | | | \--------------- Bostr.5325s0070.1.p [Boechera stricta] (67) | | | \---------------------------------------------- AA1G00066 [Aethionema arabicum] (93) | | /----- Csa13g056520.1 [Camelina sativa] (15) | /-95-+ | | \----- Csa08g053640.1 [Camelina sativa] (38) | /-100+ | | \---------- Csa02g001980.1 [Camelina sativa] (57) | /-100-+ | | | /----- Carubv10001399m [Capsella rubella] (79) /-100+ | \---100---+ | | /-100+ \----- Cagra.6594s0025.1.p [Capsella grandiflora] (90) | | | | | | | \--------------------- Bostr.10064s0009.1.p [Boechera stricta] (55) | | | | | /---100---+ /----- Araha.6997s0009.1.p [Arabidopsis halleri] (50) | | | | /-61-+ | | | | | \----- 864377 [Arabidopsis lyrata] (81) | | | \------100------+ | | | \---------- AT4G01280.2 [Arabidopsis thaliana] (66) | | | | | | /--------------------- 676743670 [Sisymbrium irio] (17) | | | | | | | | /----- GSBRNA2T00123547001 [Brassica napus] (20) | | | | /-100+ /-100+ \------100------+ /-100+ | \----- XP_013608711.1 [Brassica oleracea] (47) | | | | | /-100+ | | | | | | | /----- XP_009111444.1 [Brassica rapa] (51) | | | | | | \-100+ | | | | \-100-+ \----- GSBRNA2T00091220001 [Brassica napus] (84) | | | /-96-+ | | | | | | | /----- RrC272_p5 [Raphanus raphanistrum] (41) | | | | | \---100---+ | | | | | \----- Rsa1.0_03191.1_g00006.1 [Raphanus sativus] (49) --100+ | \-100+ | | | | \-------------------------- Thhalv10028806m [Eutrema salsugineum] (48) | | | | | \------------------------------- Tp6g00850 [Thellungiella parvula] (75) | | | | /----- XP_010556573.1 [Tarenaya hassleriana] (25) | \------------------------100------------------------+ | \----- XP_010544409.1 [Tarenaya hassleriana] (32) | \-------------------------------------------------------------- XP_010544757.1 [Tarenaya hassleriana] (19) Root part of tree: /------------------------------------------------------------------- Thecc1EG015255t1 [Theobroma cacao] (1) | | /----- Gh_A08G1186 [Gossypium hirsutum] (2) | /-100+ | | \----- Cotton_A_31259_BGI-A2_v1.0 [Gossypium arboreum] (11) | /-72-+ | | \---------- Gorai.004G159700.1 [Gossypium raimondii] (26) | /-100-+ | | \--------------- Gh_D08G1470 [Gossypium hirsutum] (34) | | | /-95-+ /---------- Gh_A11G0828 [Gossypium hirsutum] (3) | | | | | | \----100---+ /----- Gh_D11G0971 [Gossypium hirsutum] (7) | /-100+ \-100+ | | | \----- Gorai.007G102900.1 [Gossypium raimondii] (29) | | | | /-87-+ \-------------------------- Thecc1EG005269t1 [Theobroma cacao] (78) | | | | | | /----- Eucgr.D02320.1.p [Eucalyptus grandis] (59) | | \-----------100-----------+ | | \----- EcC047941.10 [Eucalyptus camaldulensis] (82) | /-86-+ | | | /----- orange1.1g019067m [Citrus sinensis] (13) | | | /-100+ | | | | \----- Ciclev10020939m [Citrus clementina] (44) | | \-----------100-----------+ | /-73-+ | /----- Neem_22224_f_1 [Azadirachta indica] (18) | | | \-100+ | | | \----- Neem_1478_f_4 [Azadirachta indica] (21) | /-100-+ | | | | \----------------------------------------- evm.model.supercontig_184.27 [Carica papaya] (87) | | | | | \---------------------------------------------- (142) | | | | /--------------------- Thhalv10014069m [Eutrema salsugineum] (6) | | | | | | /----- Rsa1.0_12829.1_g00001.1 [Raphanus sativus] (28) | | | /-100+ | | | | \----- RrC8843_p1 [Raphanus raphanistrum] (31) | | |----100---+ | | | | /----- XP_009119808.1 [Brassica rapa] (30) | | | \-100+ | | | \----- GSBRNA2T00007983001 [Brassica napus] (69) | | | | | | /----- 676736652 [Sisymbrium irio] (36) | | |-------82------+ | | /----99---+ \----- Tp6g14830 [Thellungiella parvula] (43) | | | | | | | | /--------------- Rsa1.0_01570.1_g00005.1 [Raphanus sativus] (40) | | | | | | | | | | /----- XP_009132518.1 [Brassica rapa] (42) | | | |-100-+ /-100+ | /-84-+ | | | | \----- GSBRNA2T00017886001 [Brassica napus] (74) + | | | | \-100+ | | | | | | /----- XP_013622787.1 [Brassica oleracea] (52) | | | | | \-100+ | | | | | \----- GSBRNA2T00004307001 [Brassica napus] (77) | | | | | | | | /-100+ \--------------------- KFK26868.1 [Arabis alpina] (60) | | | | | | | | | | /----- Carubv10026677m [Capsella rubella] (14) | | | | | /------100------+ | | | | | | \----- Cagra.0084s0014.1.p [Capsella grandiflora] (39) | | | | | | | | | | | | /---------- Csa02g048880.1 [Camelina sativa] (33) | | | | | /-84-+ | | | | | | | | /-100+ /----- Csa11g084480.1 [Camelina sativa] (46) | | | | | | | | \-62-+ | | | /-100+ | | \--87-+ \----- Csa18g023620.1 [Camelina sativa] (61) | | | | | | | | | /-71-+ | | | \-100+ \--------------- Bostr.7305s0060.1.p [Boechera stricta] (58) | | | | | | | | | | | | | | /----- 885383 [Arabidopsis lyrata] (24) | | | | | | | | | | | | | | \---------100--------+----- AT5G52660.2 [Arabidopsis thaliana] (62) | | | \----100---+ | | | | | | | \----- Araha.14397s0002.1.p [Arabidopsis halleri] (89) | | | | | | | | | \------------------------------------ AA77G00007 [Aethionema arabicum] (35) | | | | | | | | /----- XP_010555684.1 [Tarenaya hassleriana] (27) |-100+ | | | | | | \----------------100----------------+----- XP_010521356.1 [Tarenaya hassleriana] (80) | | | | | | | \----- XP_010537145.1 [Tarenaya hassleriana] (88) | | | | | | /---------- Neem_3772_f_2 [Azadirachta indica] (4) | | | | | | \----------------------100---------------------+ /----- Ciclev10005411m [Citrus clementina] (16) | | \-100+ | | \----- orange1.1g020389m [Citrus sinensis] (65) | | | \-------------------------------------------------------------- Eucgr.A02733.1.p [Eucalyptus grandis] (68) | | /----- Gh_A09G0416 [Gossypium hirsutum] (37) |-----------------------------100-----------------------------+ | \----- Cotton_A_40094_BGI-A2_v1.0 [Gossypium arboreum] (56) | | /----- Gh_D12G2435 [Gossypium hirsutum] (5) | /-92-+ | | \----- Gorai.008G274500.1 [Gossypium raimondii] (91) | /-100+ | | | /----- Cotton_A_01283_BGI-A2_v1.0 [Gossypium arboreum] (23) | | \-80-+ | | \----- Gh_A12G2299 [Gossypium hirsutum] (45) \-------------------------72------------------------+ | /----- Gorai.007G013200.1 [Gossypium raimondii] (53) | /-73-+ | | \----- Gh_D11G0117 [Gossypium hirsutum] (83) \-100+ | /----- Cotton_A_02413_BGI-A2_v1.0 [Gossypium arboreum] (70) \-88-+ \----- Gh_A11G0102 [Gossypium hirsutum] (71) |