PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP3254
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Subtree rooted at node 114: /---------- ORUFI02G21960.1 [Oryza rufipogon] (2) | /-98-+ /----- OBART02G20940.2 [Oryza barthii] (36) | \-99-+ | \----- ORGLA02G0180000.1 [Oryza glaberrima] (76) | |--------------- OGLUM02G21200.1 [Oryza glumaepatula] (17) /--95-+ | | /----- KN539452.1_FGP006 [Oryza longistaminata] (32) | | /-97-+ | | | \----- ONIVA02G23040.1 [Oryza nivara] (79) | | | /-100+ \-98-+---------- LOC_Os02g35660.1 [Oryza sativa japonica] (42) | | | | | \---------- BGIOSGA006236-PA [Oryza sativa indica] (61) /-100+ | | | \--------------------- OMERI02G20700.1 [Oryza meridionalis] (63) | | /-100+ \-------------------------- OPUNC02G18940.1 [Oryza punctata] (35) | | | \------------------------------- OB02G28530.1 [Oryza brachyantha] (26) /-68-+ | | /----- Brast04G166600.1.p [Brachypodium stacei] (23) | \--------------100-------------+ | \----- Bradi3g46200.1.p [Brachypodium distachyon] (67) | | /----- Oropetium_20150105_02498A [Oropetium thomaeum] (4) | /-100+ | | \----- Zpz_sc00606.1.g00040.1.sm.mk [Zoysia pacifica] (33) | /---------100--------+ | | | /----- 462943852 [Eragrostis tef] (12) | | \-100+ | | \----- 462894816 [Eragrostis tef] (15) /-74-+ | | | | /----- Pahal.A02182.1 [Panicum hallii] (21) | | | /-100+ | | | | \----- Pavir.1NG302700.1.p [Panicum virgatum] (71) | | /-100+ /-100+ | | | | | \---------- Pavir.1KG340600.1.p [Panicum virgatum] (55) | | | | /-100-+ | | | | | | /----- Sevir.1G203600.1.p [Setaria viridis] (24) | | | | | \---100---+ | | | | /-100+ \----- Seita.1G200500.1.p [Setaria italica] (60) | | | | | | /--99-+ \-70-+ | | \--------------------- Do000759.1 [Dichanthelium oligosanthes] (57) | | | \-100+ | | | | /----- GRMZM5G839518_P02 [Zea mays] (68) | | | \---------100--------+ | | | \----- Sobic.004G184200.1.p [Sorghum bicolor] (72) | | | | | | /----- PH01001160G0380 [Phyllostachys heterocycla] (45) | | \--------------100-------------+ | | \----- PH01001538G0490 [Phyllostachys heterocycla] (52) | | /-72-+ \---------------------------------------------- LPERR02G17000.1 [Leersia perrieri] (44) | | | | /----- GSMUA_Achr9P18080_001 [Musa acuminata] (3) | | /---100---+ | | | \----- GSMUA_Achr3P10120_001 [Musa acuminata] (30) | | | | | /-100-+ /----- PDK_30s925571g003 [Phoenix dactylifera] (8) | | | | /-100+ /-57-+ | | | | \----- XP_010932342.1 [Elaeis guineensis] (56) | | | | \-100+ | | \--------------100-------------+ | /----- PDK_30s1075261g004 [Phoenix dactylifera] (70) | | | \-100+ | | | \----- XP_010917385.1 [Elaeis guineensis] (74) | | | | | \--------------------- Aco021068.1 [Ananas comosus] (31) --100+ | | \--------------------------------------------------------- PEQU_11259 [Phalaenopsis equestris] (25) | | /----- Spipo0G0055600 [Spirodela polyrhiza] (46) | /-61-+ | | \----- Zosma257g00080.1 [Zostera marina] (54) \-------------------------99------------------------+ \---------- Zosma81g00950.1 [Zostera marina] (51) Subtree rooted at node 142: /---------------------------------------------- (114) | | /----- LOC_Os06g09370.1 [Oryza sativa japonica] (5) | /-100+ | | \----- ORUFI06G06220.2 [Oryza rufipogon] (11) | /-93-+ | | | /----- BGIOSGA021743-PA [Oryza sativa indica] (7) | | \-98-+ | /--87-+ \----- ONIVA06G06960.3 [Oryza nivara] (14) /--51-+ | | | | /-100+ \--------------- OGLUM06G06280.3 [Oryza glumaepatula] (59) | | | | | | /-89-+ \--------------------- OBART06G06000.2 [Oryza barthii] (27) | | | | | | /-100+ \-------------------------- OMERI06G07190.1 [Oryza meridionalis] (28) | | | | | | /-100+ \------------------------------- OPUNC06G05770.2 [Oryza punctata] (50) | | | | | \-100+ \------------------------------------ LPERR06G05570.1 [Leersia perrieri] (19) | | | \----------------------------------------- OB06G15580.1 [Oryza brachyantha] (69) /-53-+ | | /----- Traes_7AS_D56F0F9E5.4 [Triticum aestivum] (9) | | /-100+ | | | \----- TRIUR3_33956-P1 [Triticum urartu] (49) | | | | | /-100+---------- Traes_7BS_13A10F9A4.2 [Triticum aestivum] (16) | | | | | | | | /----- Traes_7DS_68E3ACF8E.1 [Triticum aestivum] (39) | | /-100-+ \-100+ /-100+ | | | \----- EMT30437 [Aegilops tauschii] (65) | | | | | | | \--------------100-------------+ \--------------- MLOC_59503.1 [Hordeum vulgare] (22) | | | | | | /----- Bradi1g46700.1.p [Brachypodium distachyon] (47) | | \------100------+ | | \----- Brast07G063600.1.p [Brachypodium stacei] (78) | | | | /----- PH01001158G0670 [Phyllostachys heterocycla] (18) | \------------------------100------------------------+ --100+ \----- PH01000014G0340 [Phyllostachys heterocycla] (75) | | /----- 462891587 [Eragrostis tef] (10) | /-100+ | | \----- 462913788 [Eragrostis tef] (66) | /----96----+ | | \---------- Oropetium_20150105_17252A [Oropetium thomaeum] (53) | | | | /---------- Zjn_sc00004.1.g01390.1.am.mkhc [Zoysia japonica] (34) | | | \-------------------99-------------------+ | /----- Zmw_sc01422.1.g00170.1 [Zoysia matrella] (37) | /-100+-100+ | | | \----- Zpz_sc00999.1.g00170.1.am.mkhc [Zoysia pacifica] (43) | | | | | \---------- Zmw_sc02130.1.g00040.1 [Zoysia matrella] (41) \--87-+ | /----- Zmw_sc02888.1.g00100.1 [Zoysia matrella] (40) | /-100+ | | \----- Zjn_sc00049.1.g02790.1.sm.mkhc [Zoysia japonica] (64) \-100+ \---------- Zpz_sc03046.1.g00050.1.sm.mkhc [Zoysia pacifica] (77) Root part of tree: /------------------------------------------------------------------- Seita.4G041700.1.p [Setaria italica] (1) | |------------------------------------------------------------------- Seita.6G063700.1.p [Setaria italica] (29) | | /--------------------------------- (142) | | | | /----------- GRMZM2G116785_P02 [Zea mays] (6) | /----100----+ /----92----+ + | | | \----------- Sobic.010G071600.1.p [Sorghum bicolor] (48) | | \----100---+ | /----100---+ \---------------------- GRMZM2G024530_P01 [Zea mays] (38) | | | | | \--------------------------------------------- Do016454.1 [Dichanthelium oligosanthes] (58) | | | | /----------- Pavir.4NG071400.1.p [Panicum virgatum] (13) \----100---+ /----100---+ | | \----------- Pavir.4NG067300.1.p [Panicum virgatum] (73) | /----100---+ | | \---------------------- Pavir.4KG095900.1.p [Panicum virgatum] (20) \----------100---------+ \--------------------------------- Pahal.F02428.1 [Panicum hallii] (62) |