PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2231
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 135: /----- Gorai.012G006900.1 [Gossypium raimondii] (2) /-100+ | \----- Gh_D04G0049 [Gossypium hirsutum] (47) /-100+ | | /----- Gh_A05G3556 [Gossypium hirsutum] (18) | \-100+ /-100-+ \----- Cotton_A_06087_BGI-A2_v1.0 [Gossypium arboreum] (60) | | | \--------------- Thecc1EG043349t1 [Theobroma cacao] (25) | /-100+ /----- Gh_A10G1798 [Gossypium hirsutum] (29) | | /-78-+ | | | \----- Cotton_A_32480_BGI-A2_v1.0 [Gossypium arboreum] (58) | \----100---+ /-100+ | /----- Gorai.011G234400.1 [Gossypium raimondii] (33) | | \-100+ | | \----- Gh_D10G2536 [Gossypium hirsutum] (52) | | | \-------------------------- evm.model.supercontig_53.160 [Carica papaya] (19) | | /---------- orange1.1g024602m [Citrus sinensis] (27) /-100+ | | | /-100+ /----- Ciclev10033380m [Citrus clementina] (30) | | | \-54-+ | | /-100-+ \----- orange1.1g045639m [Citrus sinensis] (50) | | | | | | | \--------------- Neem_563_f_1 [Azadirachta indica] (35) /-76-+ \----97---+ | | | /----- Eucgr.G02745.1.p [Eucalyptus grandis] (51) | | \------100------+ | | \----- Eucgr.J01041.1.p [Eucalyptus grandis] (64) | | | | /----- XP_010552949.1 [Tarenaya hassleriana] (16) | \--------------100-------------+ | \----- XP_010543577.1 [Tarenaya hassleriana] (73) | | /----- Cagra.0834s0030.1.p [Capsella grandiflora] (4) | /---100---+ | | \----- Carubv10016033m [Capsella rubella] (70) | | | /-100-+ /----- Csa15g013960.1 [Camelina sativa] (14) | | | /-100+ | | | | \----- Csa01g011350.1 [Camelina sativa] (20) | /-51-+ \-89-+ | | | \---------- Csa19g014100.1 [Camelina sativa] (75) | | | | | \--------------------- Bostr.22252s0013.1.p [Boechera stricta] (68) | /-100+ | | | /----- 478379 [Arabidopsis lyrata] (17) | | | /-100+ /-100+ | | | \----- Araha.4954s0008.1.p [Arabidopsis halleri] (67) | | | \------100------+ | | | \---------- AT3G10470.1 [Arabidopsis thaliana] (41) | | | | | | /----- RrC16512_p1 [Raphanus raphanistrum] (6) | | | /---100---+ | | | | \----- Rsa1.0_00951.1_g00020.1 [Raphanus sativus] (55) | | | | | | |------100------+ /----- GSBRNA2T00072910001 [Brassica napus] (10) | | | | /-100+ | | | | | \----- XP_009122879.1 [Brassica rapa] (24) | | | \-100+ | | | \---------- XP_013592850.1 [Brassica oleracea] (26) | | | | | /-92-+------------------------------- Tp3g08730 [Thellungiella parvula] (7) | | | | | | | | /----- XP_013584958.1 [Brassica oleracea] (9) /-100-+ | | | /-100+ | | | | | | \----- GSBRNA2T00110953001 [Brassica napus] (42) | | | | | /-97-+ | | | | | | | /----- XP_009146836.1 [Brassica rapa] (34) | | | | | | \-100+ | | | | |------100------+ \----- GSBRNA2T00000395001 [Brassica napus] (74) | | \-99-+ | | | | | | | /----- RrC8100_p1 [Raphanus raphanistrum] (54) | | | | \---100---+ | | | | \----- Rsa1.0_00544.1_g00005.1 [Raphanus sativus] (61) | | | | | | | |------------------------------- Thhalv10020904m [Eutrema salsugineum] (43) | | | | | | | \------------------------------- 676764944 [Sisymbrium irio] (45) /-100+ | | | | | \------------------------------------ AA93G00230 [Aethionema arabicum] (32) | | | | | \---------------------------------------------- AA12G00160 [Aethionema arabicum] (31) | | | | /---------- AT5G04390.1 [Arabidopsis thaliana] (21) | | | | | /-100+ /----- 908323 [Arabidopsis lyrata] (56) | | | \-100+ | | | \----- Araha.13695s0003.1.p [Arabidopsis halleri] (57) | | | /-100+ | | /----- Cagra.9217s0019.1.p [Capsella grandiflora] (22) | | | | /-100+ | | \-----------------100----------------+ | \----- Carubv10003458m [Capsella rubella] (46) | | |-100+ | | | | /----- Csa20g005590.1 [Camelina sativa] (23) | | | \-100+ | | | \----- Csa08g060100.1 [Camelina sativa] (38) | | | | | \--------------- Bostr.2128s0009.1.p [Boechera stricta] (53) | | | | /----- Thhalv10013864m [Eutrema salsugineum] (63) | \-------------------------68------------------------+ | \----- KFK24889.1 [Arabis alpina] (66) | | /----- GSBRNA2T00023613001 [Brassica napus] (3) --100+ /-100+ | | \----- XP_013627375.1 [Brassica oleracea] (15) | /-100+ | | | /----- XP_009130819.1 [Brassica rapa] (62) | | \-100+ | /----100---+ \----- GSBRNA2T00049321001 [Brassica napus] (71) | | | | | | /----- Rsa1.0_00285.1_g00016.1 [Raphanus sativus] (39) | | \---100---+ | | \----- RrC2674_p4 [Raphanus raphanistrum] (40) | | | | /----- XP_013620812.1 [Brassica oleracea] (8) | | /-88-+ | | | \----- GSBRNA2T00010742001 [Brassica napus] (48) \-----------------90----------------+ /-84-+ | | | /----- XP_009125554.1 [Brassica rapa] (11) | | \-100+ | | \----- GSBRNA2T00034346001 [Brassica napus] (36) | /--76-+ | | | /----- GSBRNA2T00149934001 [Brassica napus] (13) | | | /-72-+ | | | | \----- XP_013635728.1 [Brassica oleracea] (49) \-100+ \-100+ | \---------- XP_013607849.1 [Brassica oleracea] (65) | \--------------------- RrC2542_p5 [Raphanus raphanistrum] (37) Root part of tree: /------------------------------------------------------------------- Rsa1.0_00482.1_g00015.1 [Raphanus sativus] (1) | |------------------------------------------------------------------- RrC1269_p4 [Raphanus raphanistrum] (59) | | /----------------- (135) + /-------99------+ | | \----------------- Tp6g38340 [Thellungiella parvula] (72) | /-------100------+ | | \--------------------------------- 676718120 [Sisymbrium irio] (28) | | \-------100------+ /----------------- XP_009122602.1 [Brassica rapa] (5) | /------100------+ | | \----------------- GSBRNA2T00136357001 [Brassica napus] (69) \-------84-------+ | /----------------- GSBRNA2T00080902001 [Brassica napus] (12) \------100------+ \----------------- XP_013609991.1 [Brassica oleracea] (44) |