PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGMP4027
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 129: /----- Pavir.J677700.1.p [Panicum virgatum] (2) /-99-+ | \----- Pavir.1KG414100.1.p [Panicum virgatum] (32) /-100+ | \---------- Pahal.A02754.1 [Panicum hallii] (70) | /-100-+ /----- Sevir.1G257900.1.p [Setaria viridis] (11) | | /-100+ | | | \----- Seita.1G253700.1.p [Setaria italica] (66) | \-63-+ /--------------100-------------+ \---------- Do007543.1 [Dichanthelium oligosanthes] (55) | | | | /----- Sobic.004G300300.1.p [Sorghum bicolor] (28) | \------100------+ | \----- GRMZM2G117164_P01 [Zea mays] (30) | | /----- Pahal.G01769.1 [Panicum hallii] (3) | /-70-+ | | \----- Pavir.7KG269700.1.p [Panicum virgatum] (24) | /-100+ | | \---------- Pavir.7NG265400.1.p [Panicum virgatum] (65) | | | /--62-+ /---------- GRMZM2G351330_P01 [Zea mays] (49) | | | | | | \-100+ /----- Sobic.006G163900.1.p [Sorghum bicolor] (61) | | \-99-+ | /-100+ \----- GRMZM2G396527_P01 [Zea mays] (63) | | | | | | /----- Seita.7G184600.1.p [Setaria italica] (22) | | \------100------+ | /-99-+ \----- Sevir.7G194700.1.p [Setaria viridis] (37) | | | | | | /----- 462907733 [Eragrostis tef] (9) | | \---------100--------+ | | \----- 462909522 [Eragrostis tef] (38) | | | | /----- Zmw_sc04581.1.g00030.1 [Zoysia matrella] (5) | | /-100+ | | | \----- Zjn_sc00056.1.g03700.1.sm.mk [Zoysia japonica] (23) | /-100+ /-100+ | | | | | /----- Zpz_sc03644.1.g00020.1.sm.mk [Zoysia pacifica] (31) | | | | \-57-+ | | | | \----- Zmw_sc01274.1.g00100.1 [Zoysia matrella] (67) | | | /--90-+ | | | | | /----- Zpz_sc00281.1.g00510.1.am.mk [Zoysia pacifica] (19) | | | | | /-100+ | | | | | | \----- Zmw_sc03085.1.g00040.1 [Zoysia matrella] (59) | | | | \-100+ | | \---100---+ | /----- Zmw_sc03489.1.g00080.1 [Zoysia matrella] (34) | | | \-100+ | | | \----- Zjn_sc00004.1.g06010.1.sm.mk [Zoysia japonica] (45) | | | | | \--------------------- Oropetium_20150105_12247A [Oropetium thomaeum] (74) | | | | /---------- KN538984.1_FGP001 [Oryza longistaminata] (12) | | | | | |---------- OPUNC04G17950.1 [Oryza punctata] (15) | | | | | | /----- LOC_Os04g45810.1 [Oryza sativa japonica] (29) /-100+ | /-68-+ | | | /-100+ | | |----- ONIVA04G18550.1 [Oryza nivara] (33) | | | | | | | | | | | | | |----- ORUFI04G21910.1 [Oryza rufipogon] (36) | | | | | | | | | | | | \-100+----- OGLUM04G20240.1 [Oryza glumaepatula] (43) | | | | | | | | | | /--99-+ |----- ORGLA04G0173700.1 [Oryza glaberrima] (53) | | | | | | | | | | | | | |----- OBART04G20320.1 [Oryza barthii] (68) | | | | | | | | | | | /-100+ | \----- BGIOSGA016852-PA [Oryza sativa indica] (73) | | | | | | | | | | | | | \--------------- LPERR04G16440.1 [Leersia perrieri] (18) | | | | | | | | | | /-100+ \--------------------- OB04G27300.1 [Oryza brachyantha] (26) | | | | | | | | | | | | /----- PH01000001G0190 [Phyllostachys heterocycla] (42) | | | | | \---------100--------+ | | | | | \----- PH01000042G1220 [Phyllostachys heterocycla] (46) | | | | | | | | \-81-+ /----- Traes_2BL_B69300543.1 [Triticum aestivum] (13) | | | | /-78-+ | | | | | \----- EMT19543 [Aegilops tauschii] (35) | | | | /-100+ | | | | | | /----- Traes_2AL_BFB0C6D4C.1 [Triticum aestivum] (39) | | | | | \-100+ | | | \------100------+ \----- MLOC_70350.2 [Hordeum vulgare] (72) | | | | | | | | /----- Bradi5g17170.2.p [Brachypodium distachyon] (51) | | /-78-+ \---100---+ | | | | \----- Brast09G158900.1.p [Brachypodium stacei] (54) | | | | | | | | /----- Brast04G121000.1.p [Brachypodium stacei] (6) | | | | /---100---+ /-100+ | | | | \----- Bradi3g50220.1.p [Brachypodium distachyon] (16) | | | | | | | | | | | /-100-+ /----- TRIUR3_22395-P1 [Triticum urartu] (41) | | | | | | | /-88-+ | | | | | | | | \----- EMT01676 [Aegilops tauschii] (47) | | | | | | \-100+ | | | | |--------100--------+ \---------- MLOC_66350.2 [Hordeum vulgare] (69) | | | | | | | | | | | | /----- PH01000922G0150 [Phyllostachys heterocycla] (27) | | | | | \------100------+ | | | | | \----- PH01000496G0570 [Phyllostachys heterocycla] (71) | | | | | | | | | | /----- OMERI02G25450.1 [Oryza meridionalis] (7) | | | | | /----57---+ | | \-100-+ | | \----- OPUNC02G23740.1 [Oryza punctata] (44) | | | | | | | | | | /----- ORGLA02G0222500.1 [Oryza glaberrima] (10) | | | | | /-98-+ | | | | /-100-+ | \----- OBART02G26000.1 [Oryza barthii] (50) --100+ | | | | | | | | | | | | |---------- BGIOSGA008720-PA [Oryza sativa indica] (14) | | | | | | | | | | | | | |---------- ONIVA02G28400.1 [Oryza nivara] (40) | | | | | \-69-+ | | | \---------93--------+ |---------- LOC_Os02g43330.1 [Oryza sativa japonica] (48) | | | | | | | | | |---------- OGLUM02G26440.1 [Oryza glumaepatula] (57) | | | | | | | | | \---------- ORUFI02G27420.1 [Oryza rufipogon] (64) | | | | | | | \--------------------- LPERR02G21210.1 [Leersia perrieri] (8) | | | | | \---------------------------------------------- OB02G33290.1 [Oryza brachyantha] (25) | | | | /----- 462958540 [Eragrostis tef] (17) | \------------------------100------------------------+ | \----- 462873455 [Eragrostis tef] (20) | \-------------------------------------------------------------- Oropetium_20150105_02902A [Oropetium thomaeum] (58) Root part of tree: /------------------------------------------------------------------- Zpz_sc01047.1.g00010.1.sm.mkhc [Zoysia pacifica] (1) | |------------------------------------------------------------------- Zmw_sc03303.1.g00060.1 [Zoysia matrella] (21) | | /--------------------------------------------- (129) | | + | /----------- Zjn_sc00007.1.g10760.1.sm.mkhc [Zoysia japonica] (4) | | /----100---+ | /----100---+ | \----------- Zpz_sc03981.1.g00010.1.sm.mkhc [Zoysia pacifica] (52) | | | /----100---+ | | | | \---------------------- Zmw_sc05273.1.g00020.1 [Zoysia matrella] (60) | | \----100----+ \----99----+ \--------------------------------- Zmw_sc02186.1.g00030.1 [Zoysia matrella] (75) | | /----------- Zjn_sc00022.1.g07120.1.sm.mkhc [Zoysia japonica] (56) \---------------------96---------------------+ \----------- Zmw_sc03641.1.g00050.1 [Zoysia matrella] (62) |