PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP3355
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Subtree rooted at node 137: /----- BGIOSGA001093-PA [Oryza sativa indica] (2) /-66-+ | \----- ORUFI01G28020.1 [Oryza rufipogon] (7) /-62-+ | \---------- LOC_Os01g46800.1 [Oryza sativa japonica] (33) /--99-+ | \--------------- ONIVA01G28420.1 [Oryza nivara] (76) /-95-+ | | /----- OBART01G25160.1 [Oryza barthii] (40) | \-------98------+ /-94-+ \----- ORGLA01G0204900.1 [Oryza glaberrima] (72) | | /-55-+ \-------------------------- OGLUM01G28930.1 [Oryza glumaepatula] (46) | | /-100+ \------------------------------- OMERI01G22920.1 [Oryza meridionalis] (37) | | /-97-+ \------------------------------------ KN538997.1_FGP002 [Oryza longistaminata] (22) | | | \----------------------------------------- OPUNC01G25080.1 [Oryza punctata] (17) /------100------+ | | /----- OB0086G10030.1 [Oryza brachyantha] (3) | \-------------------68-------------------+ | \----- LPERR01G21480.1 [Leersia perrieri] (36) | | /----- Traes_1BL_73811B853.1 [Triticum aestivum] (4) | /-99-+ | | \----- MLOC_79171.1 [Hordeum vulgare] (24) | /-96-+ | | | /----- MLOC_17779.1 [Hordeum vulgare] (6) | | \-100+ | /-100-+ \----- EMT05704 [Aegilops tauschii] (23) | | | | | \--------------- MLOC_65699.1 [Hordeum vulgare] (63) | | | /--------100--------+ /----- Bradi2g15877.1.p [Brachypodium distachyon] (39) | | | /-98-+ | | | | \----- Bradi2g15872.1.p [Brachypodium distachyon] (65) | | \----100---+ | | \---------- Brast08G016800.1.p [Brachypodium stacei] (52) | | | | /-------------------------- ORGLA03G0413100.1 [Oryza glaberrima] (5) | | | | | | /----- KN539575.1_FGP002 [Oryza longistaminata] (30) | | | | | | | |----- BGIOSGA020403-PA [Oryza sativa indica] (35) | | | /-59-+ | | | | |----- LOC_Os05g49620.1 [Oryza sativa japonica] (59) | /-99-+ | | | | | | | /-87-+ \----- ORUFI05G28340.1 [Oryza rufipogon] (66) | | | /-100+ | | | | | | | | \---------- ONIVA05G28480.1 [Oryza nivara] (43) | | | | | /--84-+ | | | | | | |--------------- OMERI03G30520.1 [Oryza meridionalis] (47) | | | | | | | | | | | |-87-+ \--------------- OGLUM05G28080.1 [Oryza glumaepatula] (70) | | | /-100+ | | | | | | | | \--------------------- OBART05G26430.1 [Oryza barthii] (48) --100+ /--70-+ | | | | | | | | | | \-------------------------- ORGLA05G0229200.1 [Oryza glaberrima] (80) | | | | | | | | | \-100+ | /----- OPUNC05G24020.1 [Oryza punctata] (38) | | | | \------------88-----------+ | | | | \----- LPERR05G22060.1 [Leersia perrieri] (75) | | | | | | | \------------------------------------ OB05G34020.1 [Oryza brachyantha] (67) | | | | | | /----- PH01000242G1360 [Phyllostachys heterocycla] (18) | | \-------------------100------------------+ | | \----- PH01000046G1680 [Phyllostachys heterocycla] (34) | | | | /---------- Zmw_sc03092.1.g00090.1 [Zoysia matrella] (8) | | | | | /-100+ /----- Zmw_sc02252.1.g00150.1 [Zoysia matrella] (11) | | | \-100+ | /-100+ /--72-+ \----- Zpz_sc04739.1.g00040.1.sm.mk [Zoysia pacifica] (21) | | | | | | | | /-100+ \--------------- Zjn_sc00012.1.g01080.1.am.mk [Zoysia japonica] (19) | | | | | | | | | \--------------------- Zpz_sc02181.1.g00080.1.am.mk [Zoysia pacifica] (51) | | | | | | | /-87-+ /----- Zmw_sc02479.1.g00090.1 [Zoysia matrella] (25) | | | | | /-100+ | | | | | | \----- Zpz_sc00628.1.g00020.1.sm.mk [Zoysia pacifica] (27) | | | /-100+ \------100------+ | | | | | \---------- Zjn_sc00027.1.g01270.1.sm.mk [Zoysia japonica] (53) | | | | | | | | | \------------------------------- Oropetium_20150105_03836A [Oropetium thomaeum] (32) | | | | | | | | /----- GRMZM2G063880_P01 [Zea mays] (9) | | | | /-100+ | | \------100------+ | \----- Sobic.009G238200.1.p [Sorghum bicolor] (56) | | | /----100---+ | | | | \---------- Do009030.1 [Dichanthelium oligosanthes] (44) | | | | \-100+ | | /----- Pavir.1NG257900.1.p [Panicum virgatum] (20) | | | /-100+ | | | | \----- Pavir.J250500.1.p [Panicum virgatum] (71) | \------100-----+ /-88-+ | | | \---------- Pavir.3KG313200.1.p [Panicum virgatum] (78) | |-100-+ | | \--------------- Pahal.C01885.1 [Panicum hallii] (41) | | | | /----- Seita.3G139400.1.p [Setaria italica] (54) | \------100------+ | \----- Sevir.3G141700.1.p [Setaria viridis] (55) | | /----- PH01000182G0790 [Phyllostachys heterocycla] (14) | /---------100--------+ | | \----- PH01021666G0010 [Phyllostachys heterocycla] (16) | | | | /----- Traes_3AL_6E92D4E1F.1 [Triticum aestivum] (28) | | /-66-+ | | | \----- TRIUR3_29889-P1 [Triticum urartu] (31) | | | \--------------68--------------+ |---------- TRAES3BF051200110CFD_t1 [Triticum aestivum] (29) | /-99-+ | | |---------- Traes_3DL_678D51EAD.1 [Triticum aestivum] (57) | | | | /-100-+ \---------- EMT08686 [Aegilops tauschii] (74) | | | | | \--------------- MLOC_44455.1 [Hordeum vulgare] (81) \-99-+ | /----- Bradi2g45480.1.p [Brachypodium distachyon] (61) \------100------+ \----- Brast01G196100.1.p [Brachypodium stacei] (62) Root part of tree: /------------------------------------------------------------------- Zmw_sc04541.1.g00040.1 [Zoysia matrella] (1) | |------------------------------------------------------------------- Zjn_sc00029.1.g00730.1.am.mk [Zoysia japonica] (58) | | /------------------------------------- (137) | | | | /------ GRMZM2G408462_P01 [Zea mays] (15) | | /--95-+ | | | \------ Sobic.003G242800.2.p [Sorghum bicolor] (83) | /-100-+ /-------100-------+ | | | | \------------ GRMZM2G411766_P01 [Zea mays] (73) | | | | | | | | /------------------------ Do004599.1 [Dichanthelium oligosanthes] (42) | | \--100-+ | | | | | /------ Pavir.5NG409700.1.p [Panicum virgatum] (45) | | | | /-100-+ | | \-100-+ | \------ Pavir.5KG427100.1.p [Panicum virgatum] (79) | /-100-+ | /-100-+ + | | | | \------------ Pahal.E02272.1 [Panicum hallii] (68) | | | \--78-+ | | | | /------ Seita.5G249900.1.p [Setaria italica] (50) | | | \----100----+ | | | \------ Sevir.5G257600.1.p [Setaria viridis] (77) | /-100-+ | | | | \------------------------------------------- 462939384 [Eragrostis tef] (60) | | | | | | /------ Zpz_sc03394.1.g00020.1.am.mk [Zoysia pacifica] (10) | | | /-100-+ | | | | \------ Zmw_sc01051.1.g00100.1 [Zoysia matrella] (12) | /-100-+ \-----------------100----------------+ | | | | /------ Zjn_sc00036.1.g00330.1.am.mk [Zoysia japonica] (13) | | | \--97-+ | | | \------ Zmw_sc02802.1.g00170.1 [Zoysia matrella] (82) | | | | | | /------ Oropetium_20150105_11736A [Oropetium thomaeum] (26) \-100-+ \-----------------------94-----------------------+ | \------ Oropetium_20150105_28178A [Oropetium thomaeum] (49) | |------------------------------------------------------------- Zpz_sc00939.1.g00040.1.am.mk [Zoysia pacifica] (64) | \------------------------------------------------------------- Zmw_sc01698.1.g00140.1 [Zoysia matrella] (69) |