PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02802.1.g00170.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 864aa    MW: 91744.6 Da    PI: 7.4998
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02802.1.g00170.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY27.56.3e-09647669123
                                   ---SS-EEEEEEE--TT-SS-EE CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                                   ldDg +WrKYGqK++ g+++prs
  Zmw_sc02802.1.g00170.1.am.mk 647 LDDGISWRKYGQKDILGAKYPRS 669
                                   58********************8 PP
2WRKY36.59.6e-126807212159
                                   -EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY  21 prsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                    r+Y+rCt++   +C++ k+v+r++ dp +++++Y+g H++ 
  Zmw_sc02802.1.g00170.1.am.mk 680 VRAYFRCTHRhsqDCHASKQVQRADGDPLLFDVVYNGYHTCA 721
                                   69*******98999**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-23633722IPR003657WRKY domain
SuperFamilySSF1182905.1E-19641722IPR003657WRKY domain
PROSITE profilePS5081116.134642718IPR003657WRKY domain
SMARTSM007743.0E-32647722IPR003657WRKY domain
PfamPF031064.5E-6648669IPR003657WRKY domain
PfamPF031061.5E-10681720IPR003657WRKY domain
PROSITE patternPS006780815829IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 864 aa     Download sequence    Send to blast
MTKSSLISFQ YRDRIPILHV PKPASSDDYE EMPAWCAAVP SYVQPRMLLA AAIPLVFGST  60
LRARRAHPHR TAAGTGQDMM RVAGRWCTWV GEESEAGSGD ALSGGERHHS RNDSGIGARR  120
ACLDIETGRV ERAVPVLAYP PHVVAVRLVA RPCLHRTGPV PCTSSPPCIH ASFASLLDLV  180
NRLPETVNDQ RSLEGIVEDD GIKAERSGDN ATIANHAHTT HGAPGCRKAR IHMNSQRKGC  240
VSAAQWSLAA DARGPETRAA QWSLAADARG PETRTCWPPA VARAAFQIGA SGGYPATAPV  300
NGAPPRQLCT WLVLGVAVGP VCLVAWCPVR ATAAVHSAPL GPVADCTSLA IWCLLHDHEV  360
SGLLLAIKGL LPPRKATTSL RAQGRHLHAT QDLLRRPPPP RATWGLLPAL GGCCLPAPLG  420
APSASSISVL SLTLLPADEN PNTRMMAAAV AWTWGVEGMA GDLGAVANSI FRAEKNSGAI  480
KAPYSSTHLP KSKRSWMTAT EQREAERAVA AMEGLSEERR ALVGELVQVL EMARQLDAHM  540
AGQQLGGGGE ERCRALVATM RASIDRSVRI ARSCCADEAA GRLPVLGRPE SQPSGGGDGS  600
PLSAGSDQAG DSRGSGNAAG QCKKRKSTQP KWETQVRVSA VQDVAPLDDG ISWRKYGQKD  660
ILGAKYPRSV SAALDPYFLV RAYFRCTHRH SQDCHASKQV QRADGDPLLF DVVYNGYHTC  720
AQAQAVARPS NQETPHAASG ENSPPQQTQA GLEQTTGDST PMFERTVQPF ALPSNNPAYD  780
DGCKTSSGFP AGSVVAASAF MSSPAVEATP ESQLVTSSSS NHAVGVWNVP EVELASTTNS  840
PMGDMDFMFP LDDAADFLED AEYF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-17644720568OsWRKY45
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183