PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_29889-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 291aa MW: 30936.3 Da PI: 7.7197 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 84.4 | 1e-26 | 122 | 183 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK++ g+++pr+Y+rCt++ gC + k+v+r++ dp +++++Y+g+H++ TRIUR3_29889-P1 122 LDDGFSWRKYGQKDILGAKYPRAYFRCTHRhtqGCYASKQVQRAHGDPLLFDVVYHGNHTCA 183 59***************************98999**************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.5E-27 | 109 | 183 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.32E-25 | 116 | 183 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 21.482 | 117 | 180 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.9E-38 | 122 | 184 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.8E-25 | 123 | 182 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0010150 | Biological Process | leaf senescence | ||||
GO:0010193 | Biological Process | response to ozone | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0031347 | Biological Process | regulation of defense response | ||||
GO:0042542 | Biological Process | response to hydrogen peroxide | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0009507 | Cellular Component | chloroplast | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence Send to blast |
MGERCALATE LAQVLDTVRQ LEAHMGVKGG ADRGETCRAL VSSMRSSVDR SIHIAMSSCC 60 VVLGAPESPP SAGGSPRSGG SDQAADSPCR GAHAAGQSKK RKTQPKWSTQ VRVNSVEDVG 120 PLDDGFSWRK YGQKDILGAK YPRAYFRCTH RHTQGCYASK QVQRAHGDPL LFDVVYHGNH 180 TCAQGKHSNS QRPQPAASGE HRQPQPAGGQ ERISVGQETE GGVAPAFSFP SKQAGADTGS 240 DFQAGCATTA SPFMSPATSE CKASTTESPM GDMDFMLQLA DADFLDNSRY L |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 6e-20 | 114 | 182 | 1 | 68 | OsWRKY45 |
Search in ModeBase |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KR827401 | 0.0 | KR827401.1 Triticum aestivum WRKY50 transcriptional factor mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020182144.1 | 0.0 | probable WRKY transcription factor 53 | ||||
TrEMBL | M7ZE61 | 0.0 | M7ZE61_TRIUA; Putative WRKY transcription factor 53 | ||||
STRING | TRIUR3_29889-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3355 | 31 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.2 | 6e-39 | WRKY family protein |