PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM553
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 223: /--------------- Thecc1EG038442t1 [Theobroma cacao] (2) | | /---------- Gh_D04G0842 [Gossypium hirsutum] (49) /-51-+ | | | | /----- Cotton_A_41232_BGI-A2_v1.0 [Gossypium arboreum] (82) | \-100+-100+ | | \----- Gh_A04G1351 [Gossypium hirsutum] (95) | | /-100+ \---------- Gorai.012G098200.1 [Gossypium raimondii] (127) | | | | /----- Gh_A05G0024 [Gossypium hirsutum] (26) | | /-100+ | | | \----- Cotton_A_16267_BGI-A2_v1.0 [Gossypium arboreum] (131) | \---100---+ /-99-+ | /----- Gorai.009G008800.1 [Gossypium raimondii] (72) | | \-57-+ | | \----- Gh_D05G0071 [Gossypium hirsutum] (73) | | | | /---------- Neem_5877_f_5 [Azadirachta indica] (29) /--99-+ | | | | \------100-----+ /----- Ciclev10010237m [Citrus clementina] (110) | | \-100+ | | \----- orange1.1g018923m [Citrus sinensis] (114) /-74-+ | | | \------------------------------ evm.model.supercontig_199.10 [Carica papaya] (80) | | /-99-+ \------------------------------------ Eucgr.C02520.1.p [Eucalyptus grandis] (10) | | | \----------------------------------------- Eucgr.C00238.1.p [Eucalyptus grandis] (190) | | /----- Gh_A05G0999 [Gossypium hirsutum] (18) | /-51-+ | | \----- Cotton_A_17105_BGI-A2_v1.0 [Gossypium arboreum] (20) | /-100+ | | | /----- Gorai.009G122000.1 [Gossypium raimondii] (38) /------93------+ | \-100+ | | /-88-+ \----- Gh_D05G1117 [Gossypium hirsutum] (120) | | | | | | | \--------------- Thecc1EG027569t1 [Theobroma cacao] (90) | | | | | /-63-+ /----- Neem_5261_f_1 [Azadirachta indica] (32) | | | | /-100+ | | | | | \----- Neem_22260_f_1 [Azadirachta indica] (55) | | | \---100---+ | \---------70---------+ | /----- Ciclev10025985m [Citrus clementina] (81) | | \-100+ | | \----- orange1.1g018990m [Citrus sinensis] (140) | | | \------------------------- Eucgr.F03987.1.p [Eucalyptus grandis] (113) | | /----- Gh_D07G2191 [Gossypium hirsutum] (3) | /-82-+ | | \----- Gorai.001G256900.1 [Gossypium raimondii] (63) | /---100---+ | | | /----- Cotton_A_19437_BGI-A2_v1.0 [Gossypium arboreum] (116) | | \-100+ | | \----- Gh_A07G1973 [Gossypium hirsutum] (132) | | | | /----- Gh_D09G0206 [Gossypium hirsutum] (37) | /-56-+ /-99-+ | | | | \----- Gorai.006G025100.1 [Gossypium raimondii] (51) | | | /-100+ | | | | | /----- Cotton_A_28204_BGI-A2_v1.0 [Gossypium arboreum] (98) | | | | \-100+ | | | | \----- Gh_A09G0218 [Gossypium hirsutum] (135) | | \-100+ | | | /----- Gorai.006G025200.1 [Gossypium raimondii] (42) | /-94-+ | /-100+ | | | | | \----- Gh_D09G0207 [Gossypium hirsutum] (137) | | | \-100+ | | | \---------- Gh_A09G0219 [Gossypium hirsutum] (121) | | | | | | /--------------- Gh_D04G0466 [Gossypium hirsutum] (77) | | | | | /--95-+ | | /----- Cotton_A_29003_BGI-A2_v1.0 [Gossypium arboreum] (94) | | | \---100---+ /-100+ | | | | | \----- Gh_A05G3160 [Gossypium hirsutum] (126) | | | \-93-+ | | | \---------- Gorai.012G056300.1 [Gossypium raimondii] (96) | | | | | \------------------------------ Thecc1EG018386t1 [Theobroma cacao] (6) | | | |------------------------------------ Eucgr.J02131.1.p [Eucalyptus grandis] (9) | | | /-62-+ /----- Neem_17075_f_1 [Azadirachta indica] (15) | | | /-100+ | | | | \----- Neem_38613_f_1 [Azadirachta indica] (139) --85-+ | |-----------100-----------+ | | | | /----- Ciclev10013824m [Citrus clementina] (150) | | | \-100+ | | | \----- orange1.1g042319m [Citrus sinensis] (118) | | | | | |------------------------------------ evm.model.supercontig_14.38 [Carica papaya] (22) | | | | | \------------------------------------ Eucgr.I01921.1.p [Eucalyptus grandis] (56) | | | | /----- Cotton_A_06134_BGI-A2_v1.0 [Gossypium arboreum] (24) | /-50-+ /-100+ | | | | \----- Gh_A12G1529 [Gossypium hirsutum] (84) | | | /-100+ | | | | | /----- Gh_D12G1652 [Gossypium hirsutum] (66) | | | | \-96-+ | | | /-100+ \----- Gorai.008G182500.1 [Gossypium raimondii] (86) | | | | | | | | | \--------------- Thecc1EG011797t1 [Theobroma cacao] (134) | | | | | /-67-+ | /-51-+ /----- Ciclev10033673m [Citrus clementina] (27) | | | | | | /-100+ | | | | | | | \----- orange1.1g043551m [Citrus sinensis] (40) | | | \-------63------+ \----70---+ | | | | \---------- Neem_944_f_6 [Azadirachta indica] (53) | | | | | | | \------------------------- evm.TU.contig_28586.3 [Carica papaya] (119) | | | | /-57-+ \---------------------------------------------- Eucgr.B03412.1.p [Eucalyptus grandis] (79) | | | | | | /----- RrC15642_p1 [Raphanus raphanistrum] (19) | | | /-100+ | | | | \----- XP_010535324.1 [Tarenaya hassleriana] (23) | | | /-54-+ | | | | \---------- RrC1832_p1 [Raphanus raphanistrum] (35) | | \----------------100----------------+ | | \--------------- Neem_21539_f_1 [Azadirachta indica] (129) | | | | /----- GSBRNA2T00098740001 [Brassica napus] (4) | | /-100+ | | | \----- XP_009103913.1 [Brassica rapa] (112) | | /-100+ | | | \---------- XP_013588816.1 [Brassica oleracea] (59) | | /-100+ | | | | /----- RrC1460_p1 [Raphanus raphanistrum] (92) | | | \---100---+ | | | \----- Rsa1.0_02428.1_g00001.1 [Raphanus sativus] (130) | | | | | /----51---+ /----- Rsa1.0_01783.1_g00002.1 [Raphanus sativus] (74) | | | | /----65---+ | | | | | \----- RrC2497_p4 [Raphanus raphanistrum] (130) | | | | | | | | \-65-+ /----- GSBRNA2T00129553001 [Brassica napus] (99) \-92-+ | | /-100+ | | | | \----- XP_009116120.1 [Brassica rapa] (138) | | \-100+ | | | /----- GSBRNA2T00109003001 [Brassica napus] (170) | | \-100+ | | \----- XP_013600367.1 [Brassica oleracea] (110) | | | | /----- Gorai.011G225700.1 [Gossypium raimondii] (8) | | /-100+ | | | \----- Gh_D10G2551 [Gossypium hirsutum] (133) | | /-100+ | | | | /----- Gh_A10G1731 [Gossypium hirsutum] (11) | | | \-100+ | | /-99-+ \----- Cotton_A_24703_BGI-A2_v1.0 [Gossypium arboreum] (17) | | | | | | /-100+ \--------------- Thecc1EG044588t1 [Theobroma cacao] (111) | | | | | | | \-------------------- Gorai.013G003400.1 [Gossypium raimondii] (124) | |-80-+ | | | /----- orange1.1g036423m [Citrus sinensis] (60) | | \--------100--------+ | | \----- Ciclev10003896m [Citrus clementina] (67) | | | |------------------------------ Tp5g08070 [Thellungiella parvula] (25) | | \-----------100-----------+------------------------------ Thhalv10010394m [Eutrema salsugineum] (28) | | /----- XP_010550826.1 [Tarenaya hassleriana] (31) |-----------63-----------+ | \----- XP_010554502.1 [Tarenaya hassleriana] (78) | | /----- Cagra.0562s0024.1.p [Capsella grandiflora] (36) | /---100---+ | | \----- Carubv10018845m [Capsella rubella] (125) | | | /-87-+ /---------- Csa06g028810.1 [Camelina sativa] (88) | | | | | | \-100+ /----- Csa04g040400.1 [Camelina sativa] (115) | | \-100+ | /-95-+ \----- Csa09g064030.1 [Camelina sativa] (122) | | | | | | /----- 485830 [Arabidopsis lyrata] (47) |-100+ \------100-----+ | | \----- AT3G54320.1 [Arabidopsis thaliana] (68) | | | \------------------------- Bostr.0697s0045.1.p [Boechera stricta] (71) | |------------------------------ Eucgr.G02636.1.p [Eucalyptus grandis] (46) | |------------------------------ 676763662 [Sisymbrium irio] (61) | |------------------------------ Eucgr.J00316.1.p [Eucalyptus grandis] (62) | |------------------------------ KFK34667.1 [Arabis alpina] (83) | \------------------------------ evm.model.supercontig_54.28 [Carica papaya] (128) Subtree rooted at node 246: /---------- (223) | /-------------------85-------------------+ /----- XP_010532069.1 [Tarenaya hassleriana] (21) | \-100+ | \----- XP_010537864.1 [Tarenaya hassleriana] (87) | | /----- Rsa1.0_00065.1_g00040.1 [Raphanus sativus] (7) | /---100---+ | | \----- RrC4585_p1 [Raphanus raphanistrum] (57) | | | /-100+ /----- GSBRNA2T00054200001 [Brassica napus] (30) | | | /-76-+ | | | | \----- XP_013638688.1 [Brassica oleracea] (69) | | \-96-+ | /-100+ | /----- GSBRNA2T00057936001 [Brassica napus] (54) | | | \-100+ | | | \----- XP_009149048.1 [Brassica rapa] (70) | /----61----+ | | | | \-------------------- 676726830 [Sisymbrium irio] (97) | | | | | \------------------------- Thhalv10008118m [Eutrema salsugineum] (45) /-100+ | | | | /----- Csa03g019870.1 [Camelina sativa] (13) | | | /-74-+ | | | | \----- Csa17g021650.1 [Camelina sativa] (41) | | | /-99-+ | | | | \---------- Csa14g020190.1 [Camelina sativa] (44) | | /-56-+ /-99-+ | | | | | | /----- Carubv10010918m [Capsella rubella] (91) | | | | | \---100---+ | | | | /-99-+ \----- Cagra.2238s0017.1.p [Capsella grandiflora] (100) | | | | | | | | | | | \-------------------- Bostr.7128s0222.1.p [Boechera stricta] (58) | | | | /-99-+ /-100+ | | | | | /----- AT1G16060.1 [Arabidopsis thaliana] (50) | | | /-85-+ | | | | | | | | | | | \--------100--------+----- 471806 [Arabidopsis lyrata] (64) | | | | | \--68-+ | | | | | | | \----- Araha.6467s0004.1.p [Arabidopsis halleri] (180) | | | | | | | | \-85-+ | \------------------------------ KFK43842.1 [Arabis alpina] (93) --96-+ | | | | | | \----------------------------------------- Tp1g14370 [Thellungiella parvula] (16) | | | | | \---------------------------------------------- AA37G00143 [Aethionema arabicum] (75) | | | \-------------------------------------------------------- AA31G00833 [Aethionema arabicum] (14) | \------------------------------------------------------------- KFK42486.1 [Arabis alpina] (136) Root part of tree: /------------------------------------------------------------------ Cagra.1725s0044.1.p [Capsella grandiflora] (1) | |------------------------------------------------------------------ Carubv10020688m [Capsella rubella] (123) | | /-------------------------------------------- (246) | | | | /------- GSBRNA2T00146328001 [Brassica napus] (12) | | /--100--+ | | | \------- XP_009106692.1 [Brassica rapa] (34) | | /--100-+ | | | | /------- XP_013587864.1 [Brassica oleracea] (52) | | | \--100--+ | /--100-+ /--100-+ \------- GSBRNA2T00148122001 [Brassica napus] (76) | | | | | + | | | | /------- Rsa1.0_01251.1_g00003.1 [Raphanus sativus] (39) | | | | \------100-----+ | | | /---50--+ \------- RrC6144_p1 [Raphanus raphanistrum] (48) | | | | | | | | | |----------------------------- 676742804 [Sisymbrium irio] (85) | /--100--+ \--84--+ | | | | | \----------------------------- Thhalv10018877m [Eutrema salsugineum] (120) | | | | | | | \------------------------------------- Tp5g34760 [Thellungiella parvula] (89) | | | | | | /--------------- AT1G79700.2 [Arabidopsis thaliana] (5) | | | | | | \----------------100----------------+ /------- Araha.29413s0001.1.p [Arabidopsis halleri] (43) \--100-+ \--100--+ | \------- 477146 [Arabidopsis lyrata] (117) | |----------------------------------------------------------- Bostr.20129s0410.1.p [Boechera stricta] (33) | | /--------------- Csa07g058830.1 [Camelina sativa] (65) | | \--------------------100--------------------+ /------- Csa16g049360.1 [Camelina sativa] (140) \---92--+ \------- Csa09g093970.1 [Camelina sativa] (160) |