PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2502
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 115: /----- GSBRNA2T00148774001 [Brassica napus] (2) /-100+ | \----- XP_009131973.1 [Brassica rapa] (49) /-97-+ | \---------- XP_013625450.1 [Brassica oleracea] (65) /-100-+ | \--------------- GSBRNA2T00141026001 [Brassica napus] (13) | /----87---+ /---------- Rsa1.0_03605.1_g00001.1 [Raphanus sativus] (3) | | | | \----87----+ /----- Rsa1.0_23355.1_g00001.1 [Raphanus sativus] (27) | \-80-+ | \----- RrC1338_p3 [Raphanus raphanistrum] (53) | | /----- Csa02g065530.1 [Camelina sativa] (5) | | | /-97-+----- Csa18g033070.1 [Camelina sativa] (9) | | | | | \----- Csa11g093630.1 [Camelina sativa] (58) | | | /-99-+ /----- Carubv10027237m [Capsella rubella] (16) | | |-100+ | | | \----- Cagra.1317s0038.1.p [Capsella grandiflora] (39) | /--92-+ | | | | \---------- Bostr.26833s0259.1.p [Boechera stricta] (45) | | | | /-87-+ \--------------- Araha.2561s0012.1.p [Arabidopsis halleri] (46) | | | | | \--------------------- KFK27514.1 [Arabis alpina] (57) | | |-67-+ /----- XP_013618692.1 [Brassica oleracea] (44) | | /-100+ | | | \----- GSBRNA2T00083899001 [Brassica napus] (52) | \------100------+ | \---------- XP_009126663.1 [Brassica rapa] (67) /-86-+ | | /----- RrC752_p1 [Raphanus raphanistrum] (14) | | /-100+ | | | \----- Rsa1.0_02443.1_g00005.1 [Raphanus sativus] (40) | |---------78---------+ | | \---------- GSBRNA2T00096313001 [Brassica napus] (15) | | | | /----- RrC14137_p1 [Raphanus raphanistrum] (22) | | /----84---+ | | | \----- Rsa1.0_01880.1_g00001.1 [Raphanus sativus] (50) | | | | |-------84------+ /---------- XP_009120496.1 [Brassica rapa] (25) | | | | | | | | /----- GSBRNA2T00133193001 [Brassica napus] (28) | | \-100+-100+ /-------53------+ | | \----- XP_013609101.1 [Brassica oleracea] (55) | | | | | | | \---------- GSBRNA2T00093311001 [Brassica napus] (41) | | | | | |------------------------------- Tp6g21450 [Thellungiella parvula] (33) | | | | | | /----- AT5G59780.3 [Arabidopsis thaliana] (34) | | |------------96-----------+ | | | \----- 496112 [Arabidopsis lyrata] (35) | | | | | |------------------------------- Thhalv10014524m [Eutrema salsugineum] (47) | | | | | \------------------------------- 676719472 [Sisymbrium irio] (72) | | | \------------------------------------ AA97G00029 [Aethionema arabicum] (18) | | /----- XP_009149988.1 [Brassica rapa] (10) | /-99-+ | | \----- GSBRNA2T00143990001 [Brassica napus] (64) | /-100+ | | \---------- GSBRNA2T00107281001 [Brassica napus] (63) | | | /-100-+--------------- XP_013625304.1 [Brassica oleracea] (12) | | | | | \--------------- GSBRNA2T00143989001 [Brassica napus] (38) /-99-+ /-100+ | | | | /----- RrC6879_p1 [Raphanus raphanistrum] (29) | | | \------100------+ | | /-100+ \----- Rsa1.0_01743.1_g00007.1 [Raphanus sativus] (59) | | | | | | | \-------------------------- 676792848 [Sisymbrium irio] (43) | | /-88-+ | | | |------------------------------- KFK33967.1 [Arabis alpina] (48) | | | | | | | \------------------------------- Thhalv10002648m [Eutrema salsugineum] (68) | | | | | | /----- Carubv10017875m [Capsella rubella] (17) | | /-79-+ /---100---+ | | | | | \----- Cagra.10637s0001.1.p [Capsella grandiflora] (31) | | | | | | | | | |--------------- 347705 [Arabidopsis lyrata] (20) /-100+ | | | | | | | | | | /----- Csa09g041200.1 [Camelina sativa] (36) | | | | \---------100--------+ /-100+ | | | | | | \----- Csa06g019850.1 [Camelina sativa] (54) | | | /-100+ |-96-+ | | | | | | \---------- Csa04g028830.1 [Camelina sativa] (60) | | | | | | | | | | | | /----- Bostr.18473s0331.1.p [Boechera stricta] (42) | | | | | \----64---+ | | \-100-+ | \----- AT3G46130.1 [Arabidopsis thaliana] (70) --69-+ | | | | | | \----------------------------------------- Tp5g15520 [Thellungiella parvula] (51) | | | | | \---------------------------------------------- AA16G00066 [Aethionema arabicum] (61) | | | | /----- XP_010541387.1 [Tarenaya hassleriana] (6) | \------------------------100------------------------+ | \----- XP_010535526.1 [Tarenaya hassleriana] (66) | \-------------------------------------------------------------- evm.model.supercontig_190.35 [Carica papaya] (73) Root part of tree: /------------------------------------------------------------------- Gh_D07G0941 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Gorai.001G107900.1 [Gossypium raimondii] (30) | | /--------------------------- (115) | | | | /------------- Eucgr.J02073.1.p [Eucalyptus grandis] (4) | /--69-+ | | | | /--100-+ /------- orange1.1g023677m [Citrus sinensis] (11) | | | | \-100-+ | | \--95--+ \------- Ciclev10029019m [Citrus clementina] (56) | /--93--+ | | | | \-------------------- Eucgr.B02401.1.p [Eucalyptus grandis] (32) | | | | /--92--+ \--------------------------------- Neem_4729_f_9 [Azadirachta indica] (37) + | | | | \---------------------------------------- Thecc1EG041904t1 [Theobroma cacao] (19) | | | | /------- Gorai.003G136400.1 [Gossypium raimondii] (7) | /--91--+ /--91-+ | | | | \------- Gh_D03G1250 [Gossypium hirsutum] (8) | | | /--98--+ | | | | \------------- Gh_A03G0327 [Gossypium hirsutum] (71) | | \------------100-----------+ | /-100-+ \-------------------- Cotton_A_02240_BGI-A2_v1.0 [Gossypium arboreum] (24) | | | | | | /------- Cotton_A_10538_BGI-A2_v1.0 [Gossypium arboreum] (21) | | | /--91-+ | | | | \------- Gh_A13G1994 [Gossypium hirsutum] (23) | | \-------------------100------------------+ \--100-+ | /------- Gorai.013G265300.1 [Gossypium raimondii] (26) | \--99-+ | \------- Gh_D13G2393 [Gossypium hirsutum] (69) | | /------- Gh_A07G0870 [Gossypium hirsutum] (62) \-------------------------100------------------------+ \------- Cotton_A_24653_BGI-A2_v1.0 [Gossypium arboreum] (74) |