PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA1996
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 87: /----- Achn087151 [Actinidia chinensis] (2) /------------------------100------------------------+ | \----- Achn348771 [Actinidia chinensis] (43) | | /----- XP_016479713.1 [Nicotiana tabacum] (5) | /-100+ | | \----- XP_009781858.1 [Nicotiana sylvestris] (32) | /-52-+ | | | /----- Niben101Scf04455g01003.1 [Nicotiana benthamiana] (21) | | \-54-+ | /----100---+ \----- Niben101Scf09368g02010.1 [Nicotiana benthamiana] (55) | | | | | | /----- XP_016487724.1 [Nicotiana tabacum] (31) | | \---100---+ | | \----- XP_009615601.1 [Nicotiana tomentosiformis] (61) | | | /-100+ /--------------- PGSC0003DMP400003807 [Solanum tuberosum] (10) | | | | | | | | /----- Sopim04g074810.0.1 [Solanum pimpinellifolium] (44) | | | /-100-+ /-94-+ | | | | | | \----- Solyc04g074810.2.1 [Solanum lycopersicum] (52) | | | | \-100+ | /-100+ \-100+ \---------- Sopen04g029770.1 [Solanum pennellii] (45) /-100+ | | | | | | | \--------------------- Sme2.5_04383.1_g00001.1 [Solanum melongena] (18) | | | | | | /-99-+ | /----- Peaxi162Scf00139g00049.1 [Petunia axillaris] (6) | | | | \-----------100-----------+ | | | | \----- Peinf101Scf00816g01008.1 [Petunia inflata] (26) | | | | | | | \------------------------------------ DCAR_012875 [Daucus carota] (9) | | | | | | /----- XP_016442530.1 [Nicotiana tabacum] (24) | | /-99-+ /-100+ | | | | | \----- XP_009785047.1 [Nicotiana sylvestris] (57) | | | | /-100+ | | | | | \---------- Niben101Scf06939g05008.1 [Nicotiana benthamiana] (59) --85-+ | | | /-100-+ | | | | | | /----- XP_009619568.1 [Nicotiana tomentosiformis] (49) | | /--57-+ | | \---100---+ | | | | \--------100--------+ \----- XP_016454735.1 [Nicotiana tabacum] (60) | | | | | | | | | \--------------------- PGSC0003DMP400031052 [Solanum tuberosum] (37) | | | | | \-100+ | /----- Cc10_g06580 [Coffea canephora] (39) | | \-------------------100------------------+ | | \----- cra_locus_15250_iso_1 [Catharanthus roseus] (42) | | | \---------------------------------------------------- Itr_sc000583.1_g00008.1 [Ipomoea trifida] (29) | | /----- DCAR_022244 [Daucus carota] (11) \---------------------------85---------------------------+ \----- cra_locus_25847_iso_1 [Catharanthus roseus] (25) Root part of tree: /------------------------------------------------------------------- 678444337 [Utricularia gibba] (1) | |------------------------------------------------------------------- 678444340 [Utricularia gibba] (22) | | /------------------------------------------------------------ (87) | | | | /------- Ote100261710051 [Ocimum tenuiflorum] (3) | | /-100-+ | | | \------- Ote100261710021 [Ocimum tenuiflorum] (36) | | /------------99------------+ | | | \------------- SMil_00009727-RA_Salv [Salvia miltiorrhiza] (35) | | | | | | /------- Ote100131300011 [Ocimum tenuiflorum] (8) | | | /-100-+ | | | | \------- Ote100131300001 [Ocimum tenuiflorum] (54) | | | /--100-+ | | | | \------------- Ote100252220031 [Ocimum tenuiflorum] (17) | | | /--100-+ | |---------51--------+ | \-------------------- SMil_00017818-RA_Salv [Salvia miltiorrhiza] (27) + | | /--97-+ | | | | \--------------------------- Migut.H02320.1.p [Mimulus guttatus] (14) | | |--92--+ | | | \--------------------------------- XP_011100183.1 [Sesamum indicum] (56) | | | | | |---------------------------------------- Migut.E01599.1.p [Mimulus guttatus] (13) | | | | | \---------------------------------------- XP_011097523.1 [Sesamum indicum] (23) | | | | /--------------------------------- CA12g03230 [Capsicum annuum] (4) | | | | | | /-------------------- PGSC0003DMP400028197 [Solanum tuberosum] (7) | | | | | | /--100-+ /--100-+ /------------- Sopen11g005120.1 [Solanum pennellii] (12) | | | | | | | | | | | | \--59--+ /------- Sopim11g010340.0.1 [Solanum pimpinellifolium] (41) | | | \-100-+ \-100-+ | | | | \------- Solyc11g010340.1.1 [Solanum lycopersicum] (51) \--82--+ | | | | \--------------------------- Sme2.5_01011.1_g00006.1 [Solanum melongena] (48) | /--89--+ | | | /-------------------- Niben101Scf01141g00004.1 [Nicotiana benthamiana] (19) | | | | | | | | /------- XP_009784356.1 [Nicotiana sylvestris] (33) | | | /--84--+ /-100-+ | | | | | | \------- XP_016453539.1 [Nicotiana tabacum] (50) | | | | \--93--+ | /--100-+ \-----100----+ \------------- Niben101Scf01139g03005.1 [Nicotiana benthamiana] (47) | | | | | | | | /------- XP_009625368.1 [Nicotiana tomentosiformis] (30) | | | \--------100--------+ | | | \------- XP_016477918.1 [Nicotiana tabacum] (58) | | | |--92-+ | /------- Peaxi162Scf00237g00101.1 [Petunia axillaris] (15) | | \------------------100------------------+ | | \------- Peinf101Scf00939g02015.1 [Petunia inflata] (38) | | | | /------- Itr_sc000178.1_g00028.1 [Ipomoea trifida] (20) | \----------------------86----------------------+ | \------- Itr_sc000063.1_g00003.1 [Ipomoea trifida] (53) | |------------------------------------------------------------ EPS59989.1 [Genlisea aurea] (16) | | /------- Cc07_g14500 [Coffea canephora] (28) |-------------------------100------------------------+ | \------- cra_locus_38360_iso_2 [Catharanthus roseus] (62) | |------------------------------------------------------------ KZV53765.1 [Dorcoceras hygrometricum] (34) | |------------------------------------------------------------ Achn157501 [Actinidia chinensis] (40) | \------------------------------------------------------------ DCAR_014197 [Daucus carota] (46) |