PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn087151 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 26755.3 Da PI: 6.1684 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.1 | 1.8e-09 | 99 | 129 | 1 | 31 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas 31 +r++h ++Er+RR+++N+ ++ r+l+P ++ Achn087151 99 QRMTHIAVERNRRKQMNDYLAIVRSLMPASY 129 79**************************963 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.26E-8 | 89 | 139 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.54E-6 | 97 | 132 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.1E-7 | 97 | 133 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.775 | 98 | 149 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.0E-6 | 99 | 129 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence Send to blast |
MALDAMEYPP DLFGYAYKEL HTLSALWGGY EQDKTLIGIL DNSSSASSHA MQNGKEYWDP 60 DSSPEAGEGS TPAEAQGGGG RRKRRRTKSS KNKEELESQR MTHIAVERNR RKQMNDYLAI 120 VRSLMPASYV QRYSTTSPVA AAGEASAEHQ PAMAEIEVTM AESHATLKIL SKRRPRQLLK 180 LVAGIQCLML TVLHLNVTTV DQMVLYSLSV KIEDGSQLST VDEIADAVNH LLARIEEEAV 240 MC* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 81 | 85 | RKRRR |
2 | 81 | 86 | RKRRRT |
3 | 99 | 110 | RMTHIAVERNRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028052116.1 | 5e-94 | transcription factor bHLH96-like | ||||
Swissprot | Q9C7T4 | 2e-56 | BH096_ARATH; Transcription factor bHLH96 | ||||
TrEMBL | A0A2R6RNJ6 | 1e-159 | A0A2R6RNJ6_ACTCH; Transcription factor bHLH96 like | ||||
STRING | GLYMA14G35560.1 | 9e-71 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1996 | 24 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 5e-59 | bHLH family protein |
Publications ? help Back to Top | |||
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