PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100131300001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 210aa MW: 23790.2 Da PI: 8.4884 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.9 | 4.2e-14 | 23 | 74 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ +++ + a+i+ A++++k+L+ Ote100131300001|100131300001 23 QRMTHIAVERNRRRQMNDYLAVLRSLMPPS---FAQRGDQASIVGGAINFVKELE 74 79****************************...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 3.4E-13 | 21 | 76 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.14E-16 | 21 | 91 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.23E-11 | 21 | 78 | No hit | No description |
PROSITE profile | PS50888 | 15.612 | 22 | 73 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.1E-11 | 23 | 74 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.4E-9 | 28 | 79 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
MAKPVRKRRR TKPMKNKQEM ENQRMTHIAV ERNRRRQMND YLAVLRSLMP PSFAQRGDQA 60 SIVGGAINFV KELEQLHQFL EANNPANSYA NPFSNFFTFP QYSTCPSNAM SETAAERRSS 120 IADVEVMMVE SHANIKLSTK RRPKQLLNLV AGFQSIGLTV LHLNITTVDH SVLYSFSVKV 180 EDECELSTVN DIATNVHDLV GMIEEESICS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011100183.2 | 1e-112 | LOW QUALITY PROTEIN: transcription factor bHLH96-like | ||||
Swissprot | Q9C7T4 | 3e-74 | BH096_ARATH; Transcription factor bHLH96 | ||||
TrEMBL | A0A0H3Y8U2 | 1e-115 | A0A0H3Y8U2_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | XP_010272971.1 | 2e-95 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1996 | 24 | 62 |
Publications ? help Back to Top | |||
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