PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Migut.E01599.1.p | ||||||||
Common Name | MIMGU_mgv1a021658mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 139aa MW: 15645.5 Da PI: 10.1026 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.9 | 2.3e-10 | 99 | 130 | 1 | 35 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TT CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskaps 35 +r++h +Er+RR+++N+ ++ Lr+l+P++ ++ Migut.E01599.1.p 99 QRMTHITVERNRRRQMNEYLAVLRSLMPPS---YA 130 79**************************97...44 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.32E-8 | 97 | 132 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.9E-8 | 97 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.82E-9 | 97 | 133 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 11.623 | 98 | 138 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.2E-7 | 99 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 139 aa Download sequence Send to blast |
MAMEAVIKQQ DDTTSIYGEK DCNYNNMGYG ERGSNNGYYN WDPPPPYSVA RTTTSSPDTC 60 VGPAGDGFFA GGVHSPAGSR RRRRRRTKNF KNKEEMEKQR MTHITVERNR RRQMNEYLAV 120 LRSLMPPSYA QRVTAGGV* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 79 | 85 | RRRRRRR |
2 | 81 | 86 | RRRRRT |
3 | 99 | 110 | RMTHITVERNRR |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Migut.E01599.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | KP257547 | 7e-36 | KP257547.1 Salvia miltiorrhiza clone 115 basic helix-loop-helix transcription factor mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015057803.1 | 8e-33 | transcription factor bHLH96-like | ||||
TrEMBL | A0A022QUM2 | 9e-95 | A0A022QUM2_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.E01599.1.p | 1e-100 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1996 | 24 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G72210.1 | 1e-20 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Migut.E01599.1.p |