PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3692
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Subtree rooted at node 108: /----- Csa13g011010.1 [Camelina sativa] (2) /-100+ | \----- Csa08g055310.1 [Camelina sativa] (35) /-100+ | \---------- Csa20g012490.1 [Camelina sativa] (52) /-100-+ | | /----- Carubv10001139m [Capsella rubella] (13) | \---100---+ /-100+ \----- Cagra.1365s0106.1.p [Capsella grandiflora] (42) | | | \--------------------- Bostr.13129s0062.1.p [Boechera stricta] (23) | /--------100--------+ /----- 487745 [Arabidopsis lyrata] (24) | | /-100+ | | | \----- Araha.13692s0015.1.p [Arabidopsis halleri] (36) | \------100------+ | \---------- AT5G09330.1 [Arabidopsis thaliana] (41) | | /----- GSBRNA2T00134573001 [Brassica napus] (3) | /-100+ | | \----- XP_013622295.1 [Brassica oleracea] (14) | /-----------100-----------+ | | \---------- GSBRNA2T00129721001 [Brassica napus] (4) | | | | /----- GSBRNA2T00016038001 [Brassica napus] (18) | | /-100+ | | | \----- XP_013611566.1 [Brassica oleracea] (19) /-100-+ | /-100+ | | | | | /----- XP_009122507.1 [Brassica rapa] (54) | | | | \-100+ | | | /-100-+ \----- GSBRNA2T00135984001 [Brassica napus] (57) | | /-100+ | | | | | | | | /----- RrC2729_p8 [Raphanus raphanistrum] (20) | | | | /-100+ \---100---+ | | | | | | \----- Rsa1.0_01719.1_g00004.1 [Raphanus sativus] (60) | | | | | | | | | | /-65-+ \--------------------- 676752488 [Sisymbrium irio] (27) | | | | | | | | | | | \-------------------------- Tp6g33980 [Thellungiella parvula] (61) | | | | | /-100+ | | \-61-+ /----- RrC17562_p1 [Raphanus raphanistrum] (25) | | \-100+ | /---100---+ | | | | | \----- Rsa1.0_01077.1_g00010.1 [Raphanus sativus] (28) | | | | | | | | \------100------+ /----- XP_013615910.1 [Brassica oleracea] (31) | | | | /-100+ | | | | | \----- GSBRNA2T00080799001 [Brassica napus] (53) | | | \-100+ /-95-+ | | \---------- XP_009125756.1 [Brassica rapa] (59) | | | | | | | \----------------------------------------- Thhalv10013778m [Eutrema salsugineum] (17) | | | | | \---------------------------------------------------- AA44G00210 [Aethionema arabicum] (10) | | | | /----- XP_010521054.1 [Tarenaya hassleriana] (32) | \------------------------100------------------------+ | \----- XP_010547665.1 [Tarenaya hassleriana] (47) | | /---------- RrC864_p3 [Raphanus raphanistrum] (6) | | | /-100+ /----- Rsa1.0_30668.1_g00001.1 [Raphanus sativus] (9) | | \-99-+ | | \----- Rsa1.0_30931.1_g00001.1 [Raphanus sativus] (43) | | | /-100-+ /----- XP_013625495.1 [Brassica oleracea] (8) --100+ | | /-100+ | | | | \----- GSBRNA2T00141706001 [Brassica napus] (58) | | \-100+ | /-100+ | /----- GSBRNA2T00077286001 [Brassica napus] (49) | | | \-100+ | | | \----- XP_009150476.1 [Brassica rapa] (51) | /-100+ | | | | \--------------------- 676739504 [Sisymbrium irio] (39) | | | | /-100+ \-------------------------- Tp2g27130 [Thellungiella parvula] (11) | | | | | \------------------------------- Thhalv10004501m [Eutrema salsugineum] (26) | | | | /----- Cagra.0248s0087.1.p [Capsella grandiflora] (22) | | /---100---+ | | | \----- Carubv10026643m [Capsella rubella] (56) | | | \-----------100-----------+ /-100-+ /----- Csa02g072750.1 [Camelina sativa] (30) | | | /-100+ | | | | \----- Csa11g101160.1 [Camelina sativa] (33) | /-99-+ \-100+ | | | \---------- Csa18g037670.1 [Camelina sativa] (34) | | | | | \--------------------- Bostr.0568s0398.1.p [Boechera stricta] (44) \---100---+ | /---------- Araha.21283s0004.1.p [Arabidopsis halleri] (38) | | \------100------+ /----- AT5G64060.1 [Arabidopsis thaliana] (46) \-93-+ \----- 496601 [Arabidopsis lyrata] (55) Root part of tree: /------------------------------------------------------------------- Ciclev10001199m [Citrus clementina] (1) | |------------------------------------------------------------------- orange1.1g036240m [Citrus sinensis] (50) | | /---------- (108) | /------------------97-----------------+ | | \---------- evm.model.supercontig_42.145 [Carica papaya] (21) | | | | /---------- Thecc1EG028313t1 [Theobroma cacao] (5) | | /---88---+ + /---100--+ | \---------- Thecc1EG028311t1 [Theobroma cacao] (15) | | | /--------100-------+ | | | | \------------------- Thecc1EG028302t1 [Theobroma cacao] (62) | | | | | | | | /---------- Thecc1EG001450t1 [Theobroma cacao] (12) | | \---100---+ /--------100-------+ | | | | \---------- Thecc1EG001442t1 [Theobroma cacao] (16) | | | | | | \---100--+ /---------- Gh_A11G0524 [Gossypium hirsutum] (29) \---100---+ | /---99---+ | | | \---------- Cotton_A_09515_BGI-A2_v1.0 [Gossypium arboreum] (45) | \---100---+ | | /---------- Gh_D11G0608 [Gossypium hirsutum] (40) | \---99---+ | \---------- Gorai.007G065300.1 [Gossypium raimondii] (48) | | /---------- Neem_30361_f_1 [Azadirachta indica] (7) \----------------------100---------------------+ \---------- Neem_11567_f_1 [Azadirachta indica] (37) |