PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010521054.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | NAC | ||||||||
Protein Properties | Length: 394aa MW: 43965.3 Da PI: 4.4307 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156 | 1.7e-48 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtd elv++yLk+kv gkkl + e+i+e+diyk+eP+dLp k ++++++ +wyfF++r++ky +g r nrat+ gyWk tgkd++vl XP_010521054.1 6 LAPGFRFHPTDVELVKYYLKRKVMGKKLLV-EAIAEIDIYKFEPSDLPdKsCLRTGDLKWYFFCPRERKYGNGVRMNRATEYGYWKMTGKDRAVL 99 579************************999.89**************96347788999************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129 + ++e+vg ktLv++ g++p+ge+tdWvmheyrle XP_010521054.1 100 C-NNEVVGKIKTLVYHCGKSPRGERTDWVMHEYRLE 134 *.999*****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.89E-59 | 4 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.463 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.2E-26 | 8 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence Send to blast |
MVKTHLAPGF RFHPTDVELV KYYLKRKVMG KKLLVEAIAE IDIYKFEPSD LPDKSCLRTG 60 DLKWYFFCPR ERKYGNGVRM NRATEYGYWK MTGKDRAVLC NNEVVGKIKT LVYHCGKSPR 120 GERTDWVMHE YRLEDKGLAQ KDVVQDSYVL CVLFKKDGPG PRNGAQYGAP FKEEEWSDGE 180 ENTENVAALP STESPIYLPG MNRETSLVAT TSQAPKDFCG GRVSESCVSD VIATANMSLP 240 LNYADNTPLL DPNSIPTLEE ATQIPGDDIY SMLDYFVDDE SFGFGGYSQN EAGHEEPGVC 300 RDGELPLCSA ADDIFSGQPA PRDLAPGYNE NTPFFLELED LTEPLTFPGN TDSIHLIQDR 360 FGFSADDPSS CFVPTQPQPQ LQPSQPLSGD LKEL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-45 | 5 | 156 | 14 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes. {ECO:0000250|UniProtKB:Q9C8W9}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010521054.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010521054.1 | 0.0 | PREDICTED: NAC domain-containing protein 82-like | ||||
Refseq | XP_010521060.1 | 0.0 | PREDICTED: NAC domain-containing protein 82-like | ||||
Swissprot | Q9FY82 | 1e-135 | NAC82_ARATH; NAC domain-containing protein 82 | ||||
TrEMBL | A0A3P6E4B0 | 1e-137 | A0A3P6E4B0_BRAOL; Uncharacterized protein | ||||
STRING | XP_010521054.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3692 | 25 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09330.4 | 1e-138 | NAC domain containing protein 82 |
Publications ? help Back to Top | |||
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