PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2416
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 135: /----- GSBRNA2T00146022001 [Brassica napus] (3) /-100+ | \----- XP_013612936.1 [Brassica oleracea] (5) /-100+ | | /----- GSBRNA2T00009589001 [Brassica napus] (60) | \-100+ /-100-+ \----- XP_009111638.1 [Brassica rapa] (65) | | | \--------------- RrC3907_p2 [Raphanus raphanistrum] (18) | /-100+ /----- RrC89_p4 [Raphanus raphanistrum] (10) | | /---100---+ | | | \----- Rsa1.0_00964.1_g00011.1 [Raphanus sativus] (63) | | | | \-100-+ /----- GSBRNA2T00133539001 [Brassica napus] (55) | | /-100+ /-100+ | | \----- XP_013598464.1 [Brassica oleracea] (73) | | \-100+ | | | /----- GSBRNA2T00147549001 [Brassica napus] (71) | | \-100+ /-100+ | \----- XP_009150982.1 [Brassica rapa] (72) | | | | | \-------------------------- 676747066 [Sisymbrium irio] (59) /-100+ | | | \------------------------------- Tp2g22790 [Thellungiella parvula] (20) | | | \------------------------------------ Thhalv10004105m [Eutrema salsugineum] (14) | | /--------------------- Bostr.5763s0059.1.p [Boechera stricta] (4) | | | | /----- Csa20g042750.1 [Camelina sativa] (15) | | /-100+ | /-100+ | \----- Csa13g030320.1 [Camelina sativa] (44) /----100---+ | | /-100+ | | | | | \---------- Csa08g020160.1 [Camelina sativa] (47) | | | \--87-+ | | | | /----- Cagra.21346s0001.1.p [Capsella grandiflora] (25) | | | \---100---+ | | /-100+ \----- Carubv10000892m [Capsella rubella] (27) | | | | | | | | /----- 326748 [Arabidopsis lyrata] (23) | | | | /-100+ | \---100---+ | | \----- Araha.1212s0002.1.p [Arabidopsis halleri] (28) | | \------100------+ | | \---------- AT5G24590.2 [Arabidopsis thaliana] (41) | | | \------------------------------- KFK27735.1 [Arabis alpina] (56) | | /----- Rsa1.0_02586.1_g00002.1 [Raphanus sativus] (7) | /---100---+ | | \----- RrC40_p2 [Raphanus raphanistrum] (35) | | | /------100------+ /----- XP_013622434.1 [Brassica oleracea] (19) | | | /-100+ | | | | \----- GSBRNA2T00145796001 [Brassica napus] (48) | | \-96-+ | | | /----- XP_009150140.1 [Brassica rapa] (22) | | \-100+ | | \----- GSBRNA2T00109745001 [Brassica napus] (36) | | | | /----- Rsa1.0_15187.1_g00002.1 [Raphanus sativus] (12) | | /---100---+ /-77-+ /-100+ | \----- RrC654_p6 [Raphanus raphanistrum] (33) | | | | | | | | | /-100-+ /----- GSBRNA2T00125430001 [Brassica napus] (16) | | | | | | /-100+ | | | | | | | \----- XP_009149732.1 [Brassica rapa] (66) | | | | | \-100+ | | | | /-100+ | /----- GSBRNA2T00121760001 [Brassica napus] (53) | | /-100+ | | | \-100+ | | | | | | | \----- XP_013605626.1 [Brassica oleracea] (69) | | | | \-57-+ | | | | | | \--------------------- 676757664 [Sisymbrium irio] (58) | | | | | | | | | \-------------------------- Tp5g12580 [Thellungiella parvula] (64) | | | | | | | \------------------------------------ Thhalv10010340m [Eutrema salsugineum] (29) | | | | | | /----- Cagra.1838s0033.1.p [Capsella grandiflora] (13) | | | /---100---+ | | | | \----- Carubv10017199m [Capsella rubella] (67) | | /-100+ | /-100+ | | | /-100-+ /----- Csa04g035000.1 [Camelina sativa] (21) | | | | | | | /-100+ | | | | | | | | \----- Csa09g052140.1 [Camelina sativa] (50) | | | | | /-100+ \-100+ | | | | | | | \---------- Csa06g023540.1 [Camelina sativa] (52) | | | | | | | | | | | | | \--------------------- Bostr.6864s0295.1.p [Boechera stricta] (61) | | | | | /-100+ | | \-100-+ | | | /---------- AT3G49530.1 [Arabidopsis thaliana] (32) | | | | | | | | | | | | \------100------+ /----- 906244 [Arabidopsis lyrata] (46) --100+ | | \----92---+ \-100+ | | | | \----- Araha.16094s0001.1.p [Arabidopsis halleri] (68) | | | | | | | \------------------------------- KFK34231.1 [Arabis alpina] (49) | | | | | \---------------------------------------------- AA13G00126 [Aethionema arabicum] (39) | | | | /----- XP_010519577.1 [Tarenaya hassleriana] (17) | \------------------------100------------------------+ | \----- XP_010525539.1 [Tarenaya hassleriana] (51) | \-------------------------------------------------------------- evm.model.supercontig_3.170 [Carica papaya] (37) Root part of tree: /------------------------------------------------------------------- Thecc1EG015535t1 [Theobroma cacao] (1) | | /----------- Cotton_A_02366_BGI-A2_v1.0 [Gossypium arboreum] (6) | /----90----+ | | \----------- Gh_A11G0147 [Gossypium hirsutum] (62) | /----59----+ | | | /----------- Gorai.007G017500.1 [Gossypium raimondii] (8) | | \----100---+ | /----100----+ \----------- Gh_D11G0160 [Gossypium hirsutum] (45) | | | | | \--------------------------------- Cotton_A_02365_BGI-A2_v1.0 [Gossypium arboreum] (30) | | |----------69---------+ /----------- Gh_A08G0932 [Gossypium hirsutum] (24) | | /----100---+ | | | \----------- Cotton_A_33555_BGI-A2_v1.0 [Gossypium arboreum] (70) + \----------100---------+ | | /----------- Gorai.004G125900.1 [Gossypium raimondii] (42) | \----99----+ | \----------- Gh_D08G1138 [Gossypium hirsutum] (43) | | /----------- Gh_A09G1677 [Gossypium hirsutum] (2) | /----100---+ | | \----------- Cotton_A_08115_BGI-A2_v1.0 [Gossypium arboreum] (34) | /---------------100---------------+ | | | /----------- Gh_D09G1773 [Gossypium hirsutum] (38) | | \----100---+ | | \----------- Gorai.006G203800.1 [Gossypium raimondii] (57) | | | | /--------------------------------- (135) \----68----+ | | | /----------- Ciclev10019368m [Citrus clementina] (11) | /-----89----+ /----100---+ | | | | \----------- orange1.1g007393m [Citrus sinensis] (26) | | \----100---+ | | | /----------- Neem_21394_f_3 [Azadirachta indica] (31) \----100---+ \----100---+ | \----------- Neem_11713_f_2 [Azadirachta indica] (54) | | /----------- EcC002598.10 [Eucalyptus camaldulensis] (9) \---------------100---------------+ \----------- Eucgr.A00969.1.p [Eucalyptus grandis] (40) |