PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2321
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Subtree rooted at node 123: /----- orange1.1g023740m [Citrus sinensis] (2) /-100+ | \----- Ciclev10026245m [Citrus clementina] (59) /-100+ | | /----- Neem_7879_f_12 [Azadirachta indica] (28) | \-100+ | \----- Neem_33095_f_2 [Azadirachta indica] (50) | /--99-+ /----- Gh_D05G1306 [Gossypium hirsutum] (44) | | | | | /-100+----- Cotton_A_02679_BGI-A2_v1.0 [Gossypium arboreum] (54) | | | | | \-100+ \----- Gorai.009G143000.1 [Gossypium raimondii] (56) /-55-+ | | | \---------- Thecc1EG029078t1 [Theobroma cacao] (57) | | | | /----- Eucgr.J02841.1.p [Eucalyptus grandis] (15) /----75---+ \-------71------+ | | \----- evm.model.supercontig_106.31 [Carica papaya] (38) | | | \-------------------------- evm.model.supercontig_25.81 [Carica papaya] (43) | | /--------------- Gh_D07G2365 [Gossypium hirsutum] (6) | | | | /----- Gorai.001G013000.1 [Gossypium raimondii] (40) | /--55-+ /-100+ | | | | \----- Cotton_A_05718_BGI-A2_v1.0 [Gossypium arboreum] (46) /-98-+ | \-86-+ | | /-100+ \---------- Gh_Sca068518G01 [Gossypium hirsutum] (67) | | | | | | /-100+ \--------------------- Gh_A07G0118 [Gossypium hirsutum] (25) | | | | | | | \-------------------------- Thecc1EG037620t1 [Theobroma cacao] (24) | | | | | | /----- Neem_37243_f_1 [Azadirachta indica] (22) | | | /-100+ | | | | \----- Neem_1386_f_2 [Azadirachta indica] (49) /-100+ \-100+---------100--------+ | | | | /----- orange1.1g024081m [Citrus sinensis] (69) | | | \-100+ | | | \----- Ciclev10009169m [Citrus clementina] (71) | | | | | | /----- EcS754381.10 [Eucalyptus camaldulensis] (33) /--89-+ | \-----------100-----------+ | | | \----- Eucgr.C00865.1.p [Eucalyptus grandis] (63) | | | | | \----------------------------------------- XP_010542413.1 [Tarenaya hassleriana] (37) | | | | /----- XP_010539165.1 [Tarenaya hassleriana] (4) | \-------------------100------------------+ | \----- XP_010531863.1 [Tarenaya hassleriana] (45) | | /----- Cagra.1013s0027.1.p [Capsella grandiflora] (3) | /-100+ | | \----- Carubv10020636m [Capsella rubella] (61) | | | | /----- AT1G72740.1 [Arabidopsis thaliana] (30) | /-63-+-100+ | | | \----- 476410 [Arabidopsis lyrata] (47) | | | | | | /----- Csa16g035420.1 [Camelina sativa] (42) | /---------100--------+ \-100+ /-99-+ | | \----- Csa07g039840.1 [Camelina sativa] (58) | | | | | | | \--------------- Bostr.10273s0077.1.p [Boechera stricta] (66) | | | | | | /-------------------------- Tp5g27800 [Thellungiella parvula] (11) | | | | | | | | /----- XP_009105940.1 [Brassica rapa] (13) | | /-89-+ | /-100+ | | | | | | \----- GSBRNA2T00069970001 [Brassica napus] (53) | | | | /-100+ /-100+ | | | | | | | | /----- XP_013589913.1 [Brassica oleracea] (14) | | | | | | | \-100+ /-100+ | | | | | /-100-+ \----- GSBRNA2T00103365001 [Brassica napus] (68) | | | | | | | | | | | | /-100+ \-100+ \-100+ \--------------- Rsa1.0_05505.1_g00001.1 [Raphanus sativus] (72) | | | | | | | | | | | | | \--------------------- 676751274 [Sisymbrium irio] (73) | | | | | | | | \-100-+ | \------------------------------- Thhalv10018950m [Eutrema salsugineum] (32) | | | | | | | \----------------------------------------- KFK41696.1 [Arabis alpina] (7) | | | | | \---------------------------------------------- AA31G00664 [Aethionema arabicum] (35) | | | \--------------------------------------------------------- AA39G00024 [Aethionema arabicum] (52) --99-+ | /----- Carubv10009890m [Capsella rubella] (8) | /---100---+ | | \----- Cagra.0824s0121.1.p [Capsella grandiflora] (74) | | | /-100-+ /----- Csa03g021330.1 [Camelina sativa] (27) | | | /-100+ | | | | \----- Csa14g021800.1 [Camelina sativa] (51) | /-100+ \-100+ | | | \---------- Csa17g023270.1 [Camelina sativa] (31) | | | | | \--------------------- Bostr.7128s0363.1.p [Boechera stricta] (34) \----------------100----------------+ | /----- Araha.15627s0025.1.p [Arabidopsis halleri] (9) | /-100+ | | \----- 889159 [Arabidopsis lyrata] (20) \------100------+ \---------- AT1G17520.1 [Arabidopsis thaliana] (41) Root part of tree: /------------------------------------------------------------------- Rsa1.0_06452.1_g00001.1 [Raphanus sativus] (1) | |------------------------------------------------------------------- RrC4713_p1 [Raphanus raphanistrum] (26) | | /---------- (123) | /---100--+ | | \---------- KFK43935.1 [Arabis alpina] (62) | /---100---+ | | \------------------- Thhalv10008387m [Eutrema salsugineum] (18) | /---100--+ | | \----------------------------- Tp1g15660 [Thellungiella parvula] (10) | | | | /---------- XP_013599995.1 [Brassica oleracea] (19) | | /---98---+ | /----98---+ | \---------- GSBRNA2T00139678001 [Brassica napus] (39) | | | /---100---+ | | | | | /---------- GSBRNA2T00102990001 [Brassica napus] (29) + | | | \---98---+ | | \---100--+ \---------- XP_009110403.1 [Brassica rapa] (70) | | | | | | /---------- RrC11221_p2 [Raphanus raphanistrum] (21) | | \--------100-------+ | | \---------- Rsa1.0_01155.1_g00006.1 [Raphanus sativus] (48) | | | /---100--+ /---------- GSBRNA2T00089276001 [Brassica napus] (5) | | | /---100--+ | | | | \---------- XP_013583746.1 [Brassica oleracea] (16) | | | /---100---+ | | | | | /---------- GSBRNA2T00034907001 [Brassica napus] (36) | | | | \---100--+ | | | /---100--+ \---------- XP_009149205.1 [Brassica rapa] (75) | | | | | | | | | | /---------- Rsa1.0_00543.1_g00013.1 [Raphanus sativus] (64) \---100---+ \---100---+ \--------100-------+ | | \---------- RrC4766_p4 [Raphanus raphanistrum] (65) | | | \-------------------------------------- 676727126 [Sisymbrium irio] (55) | | /---------- XP_009117657.1 [Brassica rapa] (12) | /---100--+ | | \---------- GSBRNA2T00016253001 [Brassica napus] (23) \-----------------100-----------------+ | /---------- GSBRNA2T00136773001 [Brassica napus] (17) \---95---+ \---------- XP_013602750.1 [Brassica oleracea] (60) |